Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00775 ATGGGCGAGAACGGCACGAAAAGAAAGGCGTTGGGTGTGGTAACGGAGGGAGCGGAATGGGTGAAAATGCTATCAAGGAGGCTAAGCCGAAGCTTCGTAATGGGCGTGTTCATAGTGTACGGAGTGGGGCAGGGGTTCTCGGGGTCGCTCTTGAAGGTGGCCGCGGACTACTACTGGAAAGACGTGCAGAAGCTGCAGCCCTCCACCGTGCAGCTCTACGTCGCGCTCTGCTTCATCCCGTGGATCCTCAAACCCCTCTGGGGGATCCTCACCGACGCCTTCCCCCTCCGCGGCTACCACCGCCGCCCCTACTTCGTCCTCGCCGGCATCCTCGGCGCGCTCTCCGCCGCCGCCCTCGCGCTCGCCGGGACCCTCACCGCCGCCGCCGCCCTCGCCTGCTTCATCGGCGTGTCGGCGTCGCTCGCCATCGCTGACGTCACCATCGACGCCTGCATCGCCAGGAACAGCATCGAGGCCAGGGAGCTCGCGCCCGACTTGCAGACCCTCTGCGGGTTCTGCTCCGGCGTCGGCGCGCTCGTCGGATTCCTCGCCAGCGGGTTCTTCGTGCACCGTCTTGGACCCCAGGGGTCCCTGGGTCTTATGGCGCTTTCTCCAGCTTTGACAATTGTACTGGGTTTTGTGATTTATGAGAACAGAACAAATGACTTGCATATCGAAAAGAAGCAGGGGGTGTTAGAGAGTGTAGGAACGACGATTAGAGGCATGTACCGAACAATGTCGTATCCTCAAGGGTGGAAGCCTTCTCTCTACATGTTCCTTGCCCTGACTCTGAATGTAACAACTCACGAAGGCCATTTTTACTGGTACACAGATTCAAAAGCTGGCCCTGCATTTTCTCAGGAGTTTGTAGGGGTGATCTATGCAATTGGTGCAGTGGCTTCATTAATAGGGGTTCTAATCTACCACAAGGCTCTGAAAGACTACGGATTCAGAGACCTAATGTTCTATGCACAACTCCTATACGGCATATCTGGTTTGCTGGACCTGATCTTCATCCTTCGTTGGAATTTGGTTATTGGAATCCCTGATTACTTCTTTGTTGTGATCGAAGAAAGTTCTACAAGAATCACAGGCAAAATCAGATGGATGCCCATGATGGTACTGAGCACACAATTGTGCCCTTTAGGCATTGAGGGCACATTTTTCGCTCTGTTAATGTGCATTGATAGCATTGGTGCCCTATTATCCAGATGGGGTGGAGGGATGCTTCTTCGCCTCCTCCACATCACTAGGACTGACTTTACAAACCTTTGGTTGGCTGTTCTTATAAGGGATATACTTAGGTTTGCTATTCTTGCTTTGGTTTTTCTTGTCCCTAAGACAGGTCAATACGAGGAACTGCTTCCTTCTGAGGTTTCAGAAAAGAACCCGAGTGATAAGGTAGATGAAGAGACTTTGGAGCTTGTCCCCATCAATGGTAAGAGTGAAGTTTAG 1455 0.5292 MGENGTKRKALGVVTEGAEWVKMLSRRLSRSFVMGVFIVYGVGQGFSGSLLKVAADYYWKDVQKLQPSTVQLYVALCFIPWILKPLWGILTDAFPLRGYHRRPYFVLAGILGALSAAALALAGTLTAAAALACFIGVSASLAIADVTIDACIARNSIEARELAPDLQTLCGFCSGVGALVGFLASGFFVHRLGPQGSLGLMALSPALTIVLGFVIYENRTNDLHIEKKQGVLESVGTTIRGMYRTMSYPQGWKPSLYMFLALTLNVTTHEGHFYWYTDSKAGPAFSQEFVGVIYAIGAVASLIGVLIYHKALKDYGFRDLMFYAQLLYGISGLLDLIFILRWNLVIGIPDYFFVVIEESSTRITGKIRWMPMMVLSTQLCPLGIEGTFFALLMCIDSIGALLSRWGGGMLLRLLHITRTDFTNLWLAVLIRDILRFAILALVFLVPKTGQYEELLPSEVSEKNPSDKVDEETLELVPINGKSEV 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00775 484 TIGRFAM fbt: folate/biopterin transporter 33 460 IPR004324 GO:0016021
Cca05g00775 484 PANTHER FOLATE-BIOPTERIN TRANSPORTER 1, CHLOROPLASTIC 6 476 IPR039309 -
Cca05g00775 484 Pfam BT1 family 257 449 IPR039309 -
Cca05g00775 484 Pfam BT1 family 44 222 IPR039309 -
Cca05g00775 484 CDD MFS_FBT 35 444 - -
Cca05g00775 484 SUPERFAMILY MFS general substrate transporter 34 447 IPR036259 -
Cca05g00775 484 PANTHER FOLATE-BIOPTERIN TRANSPORTER 6-RELATED 6 476 - -
Cca05g00775 484 Gene3D MFS general substrate transporter like domains 20 446 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00775 Cca-Chr5 21510037 21514870 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00775 - - gmx:100806186 780.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00775 05 21510037 21514870 Cca05g00775 05 21510037 21514870 ECH