Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00765 ATGGCGTTTTGGAGATCCCTCGCGTTCTCCGCGATCATTCTCTCGCTCTTCATCCACGGCGCTCTCTGCTTCTACCTCCCCGGCGTCGCTCCGCAGGATTTCCAGAAGGGAGATCCATTGCAAGTGAAAGTAAACAAATTAACTTCAACAAAGACCCAGCTTCCGTACACTTACTATTCTCTTCCTTATTGTCCCCCAGAGAAAATAGTGGATAGTGCTGAAAATCTTGGAGAAGTTCTTCGTGGCGATCGCATTGAAAATTCTCGTTATGTGTTTAAAATGCGTGAACCGCAAATGTGCAATATTGTGTGTAAGCTTAAACTTGATGCCAAAACTGCAAAAGAGTTCAAAGAGAAGATTGATGATGAGTATCGAGTAAACATGATCTTAGATAACCTTCCTCTGGTTGTTCCCATAAAACGGGTGGATCCAGACTCTACTGTTTATCAACTTGGTTTCCATGTTGGACTCAAAGGGCAGTACAGTGGGAGCAAGGAGGAGAAGTATTTTATTCACAACCATTTGGCTTTTACTGTCAAGTATCATAGAGATACACTAACTGAATCTGCCAGAATTGTGGGCTTTGAGGTTAAGCCATTCAGTGTTAAACATGAATATGAAGGGAACTGGGATGACAAGACTCGTTTAACAACCTGTGACCCTCATGCTAAACACACAGTTGTCAATTCCAACAGTCCTCAAGAGGTTGAAGAGAACAAGGAAATTATCTTCACATATGATGTTGAATTCCAGGAGAGTGATGTGAAGTGGGCTTCAAGATGGGATGCCTATTTGCTGATGAGTGATGACCAAATTCACTGGTTCTCAATTGTTAACTCATTAATGATTGTTCTCTTTCTCTCGGGCATGGTAGCAATGATAATGCTGCGTACACTTTACCGTGATATTTCAAAGTACAATGAGTTAGAAACCCAAGAAGAAGCACAGGAAGAAACTGGTTGGAAGCTTGTCCATGGTGATGTTTTTAGGCCACCAAATAACTCAGATTTGCTGTGTGTCTATGTAGGAACTGGTGTTCAGTTTTTTGGAATGATACTAGTAACAATGATGTTTGCTGTCCTGGGGTTCCTTTCTCCTTCAAACCGAGGTGGGCTAATGACAGCCATGCTCTTGCTTTGGGTTTTCATGGGGATTTTTGCTGGTTATGCCTCAGCCCGCTTATATAAAATGTTCAAAGGTGGGGAGTGGAAGAAAATTGCCCTCAAAACTGCAATCTTGTTCCCTGCAATTGTTTCTGCCATTTTCTTTGTATTGAATGCTCTCATATGGGGACAAAAATCATCTGGAGCTGTGCCATTTGGAACAATGTTTGCCCTGATCTTTTTATGGTTTGGGATCTCGGTTCCTCTTGTTTTTGTGGGTGCTTATGTTGGATTTAAGAAGCCCGCAATTGAGAGTCCTGTGAAGACAAACAAAATCCCAAGGCAGATCCCTGAGCAGGCATGGTACATGAATCCAATCTTCTCAATTCTGATTGGAGGAATACTACCATTTGGAGCTGTTTTCATTGAGCTTTTCTTTATCCTCACATCAATCTGGTTGAATCAGTTTTACTACATCTTCGGCTTCCTCTTTTTGGTCTTCGCCATCCTCATTGTCACTTGTGCTGAGATAACCATTGTGCTTTGCTACTTCCAGTTGTGCAGTGAGGATTACTTGTGGTGGTGGCGTTCGTACCTCACATCTGGCTCCTCTGCTCTGTACCTCTTTCTTTATGCGACATTCTACTTCTTCACTAAGCTTGAAATCACGAAGTTAGTATCTGGGCTTCTGTACTTTGGTTACATGCTTATAGCGTCCTATGCCTTCTTTGTAGTAACCGGAACGATCGGATTTTACGCGTGCTTTTGGTTCACGAGGCTCATCTACTCCTCAGTCAAAATTGATTAG 1911 0.4244 MAFWRSLAFSAIILSLFIHGALCFYLPGVAPQDFQKGDPLQVKVNKLTSTKTQLPYTYYSLPYCPPEKIVDSAENLGEVLRGDRIENSRYVFKMREPQMCNIVCKLKLDAKTAKEFKEKIDDEYRVNMILDNLPLVVPIKRVDPDSTVYQLGFHVGLKGQYSGSKEEKYFIHNHLAFTVKYHRDTLTESARIVGFEVKPFSVKHEYEGNWDDKTRLTTCDPHAKHTVVNSNSPQEVEENKEIIFTYDVEFQESDVKWASRWDAYLLMSDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDISKYNELETQEEAQEETGWKLVHGDVFRPPNNSDLLCVYVGTGVQFFGMILVTMMFAVLGFLSPSNRGGLMTAMLLLWVFMGIFAGYASARLYKMFKGGEWKKIALKTAILFPAIVSAIFFVLNALIWGQKSSGAVPFGTMFALIFLWFGISVPLVFVGAYVGFKKPAIESPVKTNKIPRQIPEQAWYMNPIFSILIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFLVFAILIVTCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSALYLFLYATFYFFTKLEITKLVSGLLYFGYMLIASYAFFVVTGTIGFYACFWFTRLIYSSVKID 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00765 636 Pfam Endomembrane protein 70 55 592 IPR004240 GO:0016021
Cca05g00765 636 PANTHER TRANSMEMBRANE 9 SUPERFAMILY MEMBER 5 636 - -
Cca05g00765 636 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 5 636 IPR004240 GO:0016021
Cca05g00765 636 SUPERFAMILY MFS general substrate transporter 274 460 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00765 Cca-Chr5 21314222 21319326 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00765 11 636 Miscellaneous Gene Families AT5G10840 86.306 0.0 1108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00765 K17086 - gmx:100810506 1243.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00765 05 21314222 21319326 Cca05g00765 05 21314222 21319326 ECH
Cca05g00765 05 21314222 21319326 Cca03g01635 03 35392458 35396909 PCT