Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00759 ATGCAGAGGTTCAAAGCTCTGCTTCCGCAAACTAGGttctcacttcgcactctctgttctcatcgtcgaacattctcTGCTCAACCAAATTATGCAGAGCACCACGACGACGATTCTCAGCAACAGATTTTAGTCGAAGGAAGAGCGAAATCGCGAGCCGCTATTCTCAACAGGCCGTCTTCGCTGAACTCGCTCACTGCTTCAATGGTTGCTCGATTGAAGAGGCTGTATGATTCCTGGGAAGAGAACTCTGATATTGGTTTTGTTTTGATGAAGGGTAGTGGTAGAGCTTTTTGTTCTGGTGCCGATGTTGTTAGGCTGTATCACTCACTCAATGAAGGAAATACTGACGAAGCTGAACAATTTTTCAAAACATTATATTCATTTGTATATCTTCAAGGGACATATCTTAAACCACACGTTTCCATTTTGGATGGAATAACAATGGGATGTGGATCTGGAATTTCTCTACCAGGGATGTTCCGCGTGGTAACTGATAAAACTGTTTTTTCTCACCCAGAGGCTCAAATAGGTTTCCACCCAGATGCTGGAGCTTCTTATATTTTGTCTCGTCTACCTGGCTACTTGGGGGAATACTTGGCCCTTACAGGAGATAAGCTTAATGGTGTTGAAATGATTGCCTGCCGCCTTGCTACTCACTATTCACTAAATGCAAGGCTTTCTTTGCTTGAAGAACGCCTTGGTAAACTGATCACAGATGAACCTTCTGTTGTGGAGGCATCCCTTGCACAGTATGGTGATCTTGTTTATCCAGATAGGAGCAGTATCCTTCACAGGATTGACACTATTGATAGATGTTTCAGTCACGAAACTGTGGAGGAAATTATCGAAGCTTTGGAGAAAGAGGCTGCCGAGTCTTATGACGAATGGTGCTCGACTACTCTAAGGAAAATAAAAGAAGCCTCCCCTTTGAGTTTGAAAGTTATTTTACGATCTATACGTGAAGGTAGATTTGAAACTCTTGATAAATGTCTTGTACGTGAGTACCGCATGTCCCTACGTGGAATTTCTAAGCATGTCTCCTCTGACTTTTTCGAAGGTGTTCGAGCACGAATGGTTGATAAAGATTTTGCACCCAAGTGGGATCCACCTAGCTTAAAAGAAGTACCAGAGGACATGGTTGAATACTATTTCTCTCCATTAAGCGAAGTTCAGTCTGAACTAGTGCTGCCAACAGCTTTGCGAGAACCTTACATGTGA 1221 0.4152 MQRFKALLPQTRFSLRTLCSHRRTFSAQPNYAEHHDDDSQQQILVEGRAKSRAAILNRPSSLNSLTASMVARLKRLYDSWEENSDIGFVLMKGSGRAFCSGADVVRLYHSLNEGNTDEAEQFFKTLYSFVYLQGTYLKPHVSILDGITMGCGSGISLPGMFRVVTDKTVFSHPEAQIGFHPDAGASYILSRLPGYLGEYLALTGDKLNGVEMIACRLATHYSLNARLSLLEERLGKLITDEPSVVEASLAQYGDLVYPDRSSILHRIDTIDRCFSHETVEEIIEALEKEAAESYDEWCSTTLRKIKEASPLSLKVILRSIREGRFETLDKCLVREYRMSLRGISKHVSSDFFEGVRARMVDKDFAPKWDPPSLKEVPEDMVEYYFSPLSEVQSELVLPTALREPYM 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00759 406 CDD crotonase-like 56 220 - -
Cca05g00759 406 Coils Coil 276 296 - -
Cca05g00759 406 Pfam Enoyl-CoA hydratase/isomerase 53 385 IPR045004 -
Cca05g00759 406 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-LIKE PROTEIN 2, MITOCHONDRIAL 28 406 - -
Cca05g00759 406 SUPERFAMILY ClpP/crotonase 51 371 IPR029045 -
Cca05g00759 406 Gene3D - 37 400 - -
Cca05g00759 406 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 28 406 IPR032259 GO:0003860
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00759 Cca-Chr5 20954727 20963273 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00759 20 406 Acyl Lipid Metabolism Gene Families AT4G31810 72.051 0.0 594
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00759 K05605 - gmx:100808892 761.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00759 05 20954727 20963273 Cca05g00759 05 20954727 20963273 ECH