Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00748 ATGGGTTGGAGGTACAATGCTGGGTTGGGACTGATTGGAGCTTTTGTCTTAATATGGGTCAGCTCTGCAGAAATAACTCAGAGGATTTTTGTTGAGTATAAACAGCCATTTGCACTCACTTACCTTGGAGTATCTGTGATGGTGATCTATCTTCTCATTTCAGTTTTCAAAAAGTGGACATGTAGCTTACTGAAAATTTTGTTCAGAAACTTTCATGAGGACTACACATTAATTAGCATTTCCACTGGACTAAAAAGTAGTTTGATTACTGATAAGGAAATTAGAGAAAGAGAAGAAGGAATGCCTTTGGTCAAGAAAGAGGAAGATGAACCTCCCTTGCTTGCACTACAAAGTTATGAAGGTAGTTCATGGAAAATTGCAAAGTGTGGCTTGTACCTCACTCCAATATGGTTTGCACAAGAGTATTTTTCAAACATGGCACTTGCAAATACTAGTGTTGCGAGTACAACGATTCTGAGTTCCATGTCAGGTCTCTTTACCCTTTTCTTTGGAGCCATTCTTGGACAGGACTCAGTAAATATGACCAAAATAGCAGCTGTTTTAATTAGCATGGCTGGTGTTGCCATGACAACTATTGGAAAAACTTGGGCAGCAGATCAGCAGATTAGCATGACTCAAAAGCATTCTATCATTGGGGACATTTTTGGTCTACTCTCAGCAATATGTTGTGGCTTATTCACAGTGGTTCTCAAGAATTCTGTCGGATCAGGAGACAAGGTAGACATGGAAAAGCTTTTTGGTTGTATTGGTCTCTACAGTTTTCTTGCCTTTTGGTGGATAGCGTGGCCATTAAATGCTGTGGGAATTGAACCCCATTTCAAATTTCCAAGTTCAATGTCCACTTGGGAGATGGTTATTGCGAATAACATCTGTTCAAGTGTGATTTCAGATTACTTATGGGCACTCTCTATAATTTGGACAGCTCCTTTGGTTGCTACATTGGGCATGTCCTTGACAATTCCAGTTGCCATGATAGCTGACATGGTTATACATGGTCGCAAGTACTCTGCACTATACATCCTTGGATGCATTCAGGTTTTTGCAGGATTTACACTAGCAAACCTTTCGGATAAGATTTCAGGAAGTGATAGAGAATGA 1119 0.3995 MGWRYNAGLGLIGAFVLIWVSSAEITQRIFVEYKQPFALTYLGVSVMVIYLLISVFKKWTCSLLKILFRNFHEDYTLISISTGLKSSLITDKEIREREEGMPLVKKEEDEPPLLALQSYEGSSWKIAKCGLYLTPIWFAQEYFSNMALANTSVASTTILSSMSGLFTLFFGAILGQDSVNMTKIAAVLISMAGVAMTTIGKTWAADQQISMTQKHSIIGDIFGLLSAICCGLFTVVLKNSVGSGDKVDMEKLFGCIGLYSFLAFWWIAWPLNAVGIEPHFKFPSSMSTWEMVIANNICSSVISDYLWALSIIWTAPLVATLGMSLTIPVAMIADMVIHGRKYSALYILGCIQVFAGFTLANLSDKISGSDRE 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00748 372 PANTHER THIAMINE-REPRESSIBLE MITOCHONDRIAL TRANSPORT PROTEIN THI74-LIKE ISOFORM X1 1 368 - -
Cca05g00748 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 129 201 - -
Cca05g00748 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 285 365 - -
Cca05g00748 372 PANTHER SOLUTE CARRIER FAMILY 35, MEMBER F5 1 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00748 Cca-Chr5 20702553 20708774 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00748 K15289 - gmx:100805891 654.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00748 05 20702553 20708774 Cca05g00748 05 20702553 20708774 ECH