Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00699 ATGGGGCATCAATACCACCAAGCAACAGATGGTCTTTTGAACCTTTTCACGAAAGCCAATCACGATCTCTCTTTGGTTCACCATCGCCTCGAAAAGGAGTTTCAGCACGTTTACCCTGACAACGCTAACCCTATGAAGTTGGTTTCTAGGATCAAGAAGGTTCAGGAAGATATAGAAATCTTGAAGGGGCAGTGCCATGAACTTCTGGCTGCTAAGCAGGATTTGATCGATAAGGCTCAGAGAATTCTGGTTGAGAATAGGAATTTGGTGCAGCGTATGCAACCGCCCTTGGGCATCTCCGACACTGGTGAAGATGATGCTGCATTCACTAACTTCAAAGAGGTAATTGAAGAAAGGACAGCACGAGTAAGATCCAAAACAGGGAATGAAACACATGATGCTGATTCTGGAGATATCAACAAACTACTATTCTCAGCTATAGATCAAAGAAGACGAAAAATTCAGATCGGATCGAACAAGTTGAGAAAGAAGCGAAGATGGGAAAGGAAagtagcagcagcagcagcagcaACCCGGTTCAGCTCCGCAACTCAAGTCCTAGCGCCTCATGTCACCCACCATCTTCTTCGTCGCGAAATACAAACGCTGCTGGTTTTCGCTATGTTGGCTCTCGTCAAGGGAGTAAAAGAAGAGACATGGGAAGCCTTTATAGCTGATGCACTTTTCCTTGCCAAGATTTGTCTTTTTCTCCTAGCCTTTACAATGGATCGACGCTTAGCCATTTGGTATATTCTTGTATTTTTAGTGATACATATGTTAACTCAACAACCTCCATTCGAAGGACTAGGTACATCTAGCAAGCTAACACCATTGCAGTTGGAAAGCCTTCTGACAGAGGGGACCACTACAAGATTGTGGCTGGTGGAATTTCGTGCTTCATATTCACCTGCTTGCATTCGCTCAAGTCAGCAGTTTCCTGAGCTCTCAATTACATACTCAAGCAAAAATTTATCATTTGGAATAGTTGATGTTGGTCTCTTTCCCAATGCTGCTGAAAAATTCGGAATATCGCTAAGTGGAAGCATGGGCCAGCTTCCAACATTTATCTTATTTGAGAATGCAGCTGAAGTTGCCCGCTTTCCAGAGTTGGATTTTGAAGCTACATATTTTCACCCTACGATTACAAAGGGACTTCTTTCTCGACATTTTGAGCTTGATCGGTACCTTCTCGAATATATTAATGGTAAATAG 1212 0.4216 MGHQYHQATDGLLNLFTKANHDLSLVHHRLEKEFQHVYPDNANPMKLVSRIKKVQEDIEILKGQCHELLAAKQDLIDKAQRILVENRNLVQRMQPPLGISDTGEDDAAFTNFKEVIEERTARVRSKTGNETHDADSGDINKLLFSAIDQRRRKIQIGSNKLRKKRRWERKVAAAAAATRFSSATQVLAPHVTHHLLRREIQTLLVFAMLALVKGVKEETWEAFIADALFLAKICLFLLAFTMDRRLAIWYILVFLVIHMLTQQPPFEGLGTSSKLTPLQLESLLTEGTTTRLWLVEFRASYSPACIRSSQQFPELSITYSSKNLSFGIVDVGLFPNAAEKFGISLSGSMGQLPTFILFENAAEVARFPELDFEATYFHPTITKGLLSRHFELDRYLLEYINGK 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00699 403 Gene3D - 6 118 - -
Cca05g00699 403 Coils Coil 51 71 - -
Cca05g00699 403 Pfam Spindle and kinetochore-associated protein 2 6 112 IPR042091 -
Cca05g00699 403 Gene3D Glutaredoxin 275 396 - -
Cca05g00699 403 PANTHER SPINDLE AND KINETOCHORE-ASSOCIATED PROTEIN 2 8 149 IPR026762 GO:0000940|GO:0005876|GO:0007059|GO:0008017|GO:0051301
Cca05g00699 403 SUPERFAMILY Thioredoxin-like 261 368 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00699 Cca-Chr5 18285462 18298258 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00699 K25112 - gmx:100527594 421.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00699 05 18285462 18298258 Cca05g00699 05 18285462 18298258 ECH