Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00698 ATGGAGCACGAGTTGCACGAAAGATGGGAGGGGAAGGTATCAGCGAAGCTGAGAAACGCCACTAAAGAACAAGCATGGCCCCTTGTGAAGGACTTCTTCAATCTCCACAAGCGCTTCCCTACCCTCGCCACGTGTTACGGGATTCACGGATCTAACGGTGAGCCTGGCTGCATACGATACTGCGCCGGCTCCTCCATTCCATCCAAATCCAACGCCTCGGGGAGCGTGAGCTGGTCAAAGGAAAGGCTGGTAGTCGTTGATGATGTTGACTTCAGCCTCAAGTACGAGATGGTTGACGGCAACATTGGGTTCAGGTCATACGAGTCAACCATGAAGGTCCTCAGCGATGATGACTCTGATGGATGCATGTTGGAATGGTCCTTCGCCGTTGACCCCGTTGAAGGCTTGCTTCTTCAGGATCTCGTCACCAAGTACCATGTGGGCCTCCAACTTATGGCCCACAAAATGGAGGACGAAATTCAAGGTTTAGTCACCGGAATTATGTAG 507 0.5207 MEHELHERWEGKVSAKLRNATKEQAWPLVKDFFNLHKRFPTLATCYGIHGSNGEPGCIRYCAGSSIPSKSNASGSVSWSKERLVVVDDVDFSLKYEMVDGNIGFRSYESTMKVLSDDDSDGCMLEWSFAVDPVEGLLLQDLVTKYHVGLQLMAHKMEDEIQGLVTGIM 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00698 168 Gene3D - 3 165 IPR023393 -
Cca05g00698 168 PANTHER POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORTER 5 161 - -
Cca05g00698 168 Pfam Polyketide cyclase / dehydrase and lipid transport 19 145 IPR019587 -
Cca05g00698 168 PANTHER - 5 161 - -
Cca05g00698 168 SUPERFAMILY Bet v1-like 19 150 - -
Cca05g00698 168 CDD PYR_PYL_RCAR_like 9 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00698 Cca-Chr5 18280534 18282996 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00698 - - ccaj:109793396 349.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00698 05 18280534 18282996 Cca05g00698 05 18280534 18282996 ECH