Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00676 ATGGCTTGTCTTCAATTCCTTCCGCAAGCGCTATCAGAAACCCCTTCCAAACTGCTTCACCGCCGATTCCATCGCCACTGCCTCGTTGCTAAACGCACCTCTCTCAGCGGCTCCAACCAATCTGGGGACTCGCTTCATTCTAAAACTCAAGTGTCTCGTGTTCCGCTTTTGACTTCCTCGGAGGCCTATGAAAGGCTAAAAACGTTCAGAGGAAAGATAAATGGCAAGCAACAATTCCTTGCCATGTATTCTAGTATATTTGGTGGGATAACAACAGACCCAGCTGCTATGGTTATTCCCATGGATGACCACATGGTCCATAGGGGCCACGGTGTATTTGATACTGCAGCAATAGTGGACGGATACTTATATGAGCTAGATCAACACCTTGACCGCTTTTTAAGTTCAGCATCCATGTCTAAAATAGATCCCCCATTTGATCGTGGAAGCATACGAAGAATACTCATAGAAACTGTAAGTGCTTCCAAGTGTAGAAAAGGGTCACTAAGATATTGGCTCTCAGCAGGACCTGGTGACTTTCAGTTATCACCCTCTGGCTGCCACCAATCAAGTCTTTATGCAGTAGTAATACAGGATCTGTCACCATCGTCGCTTAATTTCAAGGGAGTTAAAGTCATTACTTCATCTATCCCCATTAAAGACCCCCAGTTTGCTATCACTAAGAGTGTGAATTATCTTCCAAATGTGCTCTCAAAGGTGGAAGCTGAAGAAGCTGGTGCTTTTGTGGGCATTTGGCTTGATGGGGAAGGTTTTGTTGCTGAAGGGCCTAATATGAATGTGGCTTTTGTCACTAAAGAGAAGGAACTTATAATGCCTTACTTTGACAAAATTTTAAGTGGCTGCACCGCTAAGAGAGTTTTAACCCTTGCTGAGAGTTTGTTAAGGGAGGGTAAGCTTAAGGGAATAATGGTGAAAAATGTGACTGTTGAGGAAGGTAAGAAAGCGGATGAAATGATGCTTCTTGGCAGTGGAGTTCTTGTTTGCCCTGTAGTGCAGTGGGATGAGCAGGTTATTGGTGATGGTAAAGAAGGCCATATAACACAGGCTCTTTTAAATCTAATTGTTGAGGACATGAAATCAGGACCCTCTACTGTTCGTACACTTATTCCTTATTGA 1137 0.4371 MACLQFLPQALSETPSKLLHRRFHRHCLVAKRTSLSGSNQSGDSLHSKTQVSRVPLLTSSEAYERLKTFRGKINGKQQFLAMYSSIFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAIVDGYLYELDQHLDRFLSSASMSKIDPPFDRGSIRRILIETVSASKCRKGSLRYWLSAGPGDFQLSPSGCHQSSLYAVVIQDLSPSSLNFKGVKVITSSIPIKDPQFAITKSVNYLPNVLSKVEAEEAGAFVGIWLDGEGFVAEGPNMNVAFVTKEKELIMPYFDKILSGCTAKRVLTLAESLLREGKLKGIMVKNVTVEEGKKADEMMLLGSGVLVCPVVQWDEQVIGDGKEGHITQALLNLIVEDMKSGPSTVRTLIPY 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00676 378 Gene3D - 200 372 IPR043132 -
Cca05g00676 378 PANTHER BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE-LIKE 52 376 - -
Cca05g00676 378 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 87 365 IPR036038 GO:0003824
Cca05g00676 378 CDD PLPDE_IV 103 361 - -
Cca05g00676 378 PANTHER AMINO-ACID AMINOTRANSFERASE 52 376 - -
Cca05g00676 378 Pfam Amino-transferase class IV 111 339 IPR001544 GO:0003824
Cca05g00676 378 Gene3D - 59 198 IPR043131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00676 Cca-Chr5 17196270 17199485 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00676 K18482 - gmx:100794026 638.647