Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00663 ATGGCGCAACTTGGAGTCCCATTCAAGTTACAACAATGCAAactctctcatattcaacaaactcacccacacactcgctattccttctctcactctctctctcctctTCCCACCTTCACCACCAAACCTTCTCGCCATGCCCACCCCTTGTCCACGCTTCGTTCCCGCACTCTCGTCGCACGCTGCAGCTCCAACAAATCAGATATAATGTCGCAATTGGAGCTTGGGAAACCCGACCCCAAGGGGAAACCCCACAAACGAGTCAACGGTATATTCTGGATCATTCTCCTCAACATTGCTGTATTCGTTGCTGACCACTTTTTTCAGGTTAATGGGATCAAGGCTTTGTACTTATTCCACAATTGGCCTGCTTGGTACCAGTTTGTCACAGCTACATTTTGTCATGCTAATTGGAAGCATCTTTCTAGCAACCTTTTCTTCTTGTACATTTTTGGAAAGCTTGTTGAAGAAGAGGAAGGGAACTTTGCTTTGTGGCTCTCTTACATTCTTACTGGTGTAGGAGCAAACCTTGTTTCATGGCTGGTTTTACCAAGAAATACGGTTTCTGTTGGAGCTTCTGGTGCTGTTTTTGGGTTGTTTACTATTAGTGTCCTTGTAAAGATGTCCTGGGATTGGAGGAAGATCCTTGAAGTGCTTATATTGGGTCAGTTTGTAATAGAAAAGGTCATGGAAGCAGCCCAAGCTTCAACATCATTATCAGGAACCTTTCGTGGAGGCTATGCATTACAGAGTGTAAATCATATTGCACATCTTTCAGGTGCTCTTGTTGGTGTGCTTTTGGTTTGGCTACTTAGCAAAGTTCCTTCTGATCCTTCAGACCAATAA 846 0.4066 MAQLGVPFKLQQCKLSHIQQTHPHTRYSFSHSLSPLPTFTTKPSRHAHPLSTLRSRTLVARCSSNKSDIMSQLELGKPDPKGKPHKRVNGIFWIILLNIAVFVADHFFQVNGIKALYLFHNWPAWYQFVTATFCHANWKHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANLVSWLVLPRNTVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTSLSGTFRGGYALQSVNHIAHLSGALVGVLLVWLLSKVPSDPSDQ 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00663 281 Gene3D - 86 276 IPR035952 -
Cca05g00663 281 PANTHER RHOMBOID-LIKE PROTEIN 11, CHLOROPLASTIC-RELATED 43 280 - -
Cca05g00663 281 PANTHER RHOMBOID-RELATED PROTEIN 43 280 - -
Cca05g00663 281 SUPERFAMILY Rhomboid-like 87 275 IPR035952 -
Cca05g00663 281 Pfam Rhomboid family 125 273 IPR022764 GO:0004252|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00663 Cca-Chr5 16462527 16466057 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00663 - - gmx:100781449 452.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00663 05 16462527 16466057 Cca05g00663 05 16462527 16466057 ECH