Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00661 ATGCTCAAGTTGTGGAAATGGTACCAGAATTGCTTGGCGGTTCACCCTGTTAAGACACAGGTCATCAGCTCTGGCTTGATTTGGGGTGCTGGTGACATAGCTGCTCAGGCAGTTACCCACTACACTGCCAAGACCCATGTCACAATAGATGAGGATGAGAAAAAGGAATTCAAGATCAACTGGAAACGGGTGTCTACGACCAGCTTGTTTGGGTTAGGATTTGTTGGCCCTGTTGGCCACTACTGGTACGAAGGTTTGGATCGGTTTATAAGATTGAGACTTATGCTCAAACCGAATTCGGTCCGCTTTGTTGCAACCAAAGTTGTGGTTGATGGGTTTCTCTTTGGACCATTGGATTTACTTGTGTTTTTTACATACATGGGTTTTTCTACTGGCAAGAGTGTTCCTCAAATCAAAGAAGATGTGAAGAGAGATTTTCTGCCAGCCTTTGTTTTAGAAGGGGGCATATGGCCAGTTGTTCAGGTTGCGAATTTTCGGTTTATACCAGTAAGGTATCAGCTCCTTTATGTCAACTTCTTCTGCTTGTTGGATAGCTGTTTCTTGTCTTGGGTTGAGCAACAACAGGATGCTCAATGGAAACAATGGTTGAAATCATTTCTTCCTTTGAAGTAA 633 0.4344 MLKLWKWYQNCLAVHPVKTQVISSGLIWGAGDIAAQAVTHYTAKTHVTIDEDEKKEFKINWKRVSTTSLFGLGFVGPVGHYWYEGLDRFIRLRLMLKPNSVRFVATKVVVDGFLFGPLDLLVFFTYMGFSTGKSVPQIKEDVKRDFLPAFVLEGGIWPVVQVANFRFIPVRYQLLYVNFFCLLDSCFLSWVEQQQDAQWKQWLKSFLPLK 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00661 210 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 1 209 IPR007248 GO:0016021
Cca05g00661 210 Pfam Mpv17 / PMP22 family 129 189 IPR007248 GO:0016021
Cca05g00661 210 PANTHER PEROXISOMAL MEMBRANE 22 KDA (MPV17/PMP22) FAMILY PROTEIN 1 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00661 Cca-Chr5 16417607 16421755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00661 7 195 Miscellaneous Gene Families AT2G14860 23.810 9.70e-17 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00661 K13348 - gmx:100805283 412.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00661 05 16417607 16421755 Cca05g00661 05 16417607 16421755 ECH