Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00655 ATGGAGTTTCCTCTCTCATTCATCTTTACATTACTCAATCTTGCAGTGGCAGTAACTCATGCAGCCTTACCTCCTGAAGTTTACTGGAAATCCAAGCTTCCCACTACTCCAATGCCTAAAGCCATTATAGATATCCTACACCCTGATTGGGTAGAAGAGAAAAGCACGTCAGTGAGCGTAGGCAAGGGAGGCGTGAACGTCGACACAGGGAAAACAAAGCCCGGAGGCACATCAGTCAACGTAGGAAAAGGCGGAGTCAACGTAAACGTAGGCCACGGAAATcccaatcccaagcccaatcccaagcccaagcccaagcccaagcGCAAAGGCACATCCGTCAGCGTCGGGAAAGGTGGCGTGAACGTGCACACAGGCCCAAAGGGAAAGCCCGTGCATGTTGGAGTGGGCCCACACTCTCCATTTGATTACAATTATGCAGCCAGCGATACCCAACTAAACTCCGACCCCAACGTGGCACTCTTCTTCTTGGAAAAGGACTTGCATCAAGGAACCAAATTTAACCTACACTTCACTCCCACCTCAAACATTGAAGCCACGTTCTTGCCTCGCACAGTTGCTGACTCCATACCCTTTTCATCAAACAAGGTCAGCGACACACTCAACGAGTTCTCCATCACGCCAGGCTCAGACGAGGCCCAAACTGTGAAGAACACGTTGAGTGAGTGCCAAGAGCGTGGCATCAAGGGAGAGGAGAAGCGTTGCGTGACTTCACTCGAGTCCATGGTTGATTTCGCCACTTCCAAGCTCGGGAACACTGTTGACGCTGTTTCCACGGAGGTGACAAAAGAGAGTGCGTTACAACAACAACAATATAGAATATCAGGTTATTCAGGCGTTAAGAACTTGGGTGGGGACCACAAAGGTGTTGTTGCGTGCCACAAAGAGAGTTACCCTTATGCGGTGTTCTATTGTCACAAATCGGATAGCACCAAGGTTTATTCTGTTCCGTTGGAGGGTGCTGATGGAAGCAGGGTCAAAGCTGTTGCAGTGTGTCACACTGACACGTCACGTTGGAACCCCAAACATTTGGCCTTCAAAGTGCTTAAGGTTCAACCAGGGACTGTTCCTGTTTGCCACTTTCTACCTCGGGATCATGTTGTCTTTGTTCCCAAGTGA 1140 0.4746 MEFPLSFIFTLLNLAVAVTHAALPPEVYWKSKLPTTPMPKAIIDILHPDWVEEKSTSVSVGKGGVNVDTGKTKPGGTSVNVGKGGVNVNVGHGNPNPKPNPKPKPKPKRKGTSVSVGKGGVNVHTGPKGKPVHVGVGPHSPFDYNYAASDTQLNSDPNVALFFLEKDLHQGTKFNLHFTPTSNIEATFLPRTVADSIPFSSNKVSDTLNEFSITPGSDEAQTVKNTLSECQERGIKGEEKRCVTSLESMVDFATSKLGNTVDAVSTEVTKESALQQQQYRISGYSGVKNLGGDHKGVVACHKESYPYAVFYCHKSDSTKVYSVPLEGADGSRVKAVAVCHTDTSRWNPKHLAFKVLKVQPGTVPVCHFLPRDHVVFVPK 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00655 379 PANTHER BURP DOMAIN-CONTAINING PROTEIN-RELATED 7 378 - -
Cca05g00655 379 SMART BURP_2 160 379 IPR004873 -
Cca05g00655 379 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 7 378 IPR044816 -
Cca05g00655 379 MobiDBLite consensus disorder prediction 60 133 - -
Cca05g00655 379 ProSiteProfiles BURP domain profile. 162 379 IPR004873 -
Cca05g00655 379 Pfam BURP domain 161 378 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00655 Cca-Chr5 16004070 16006713 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00655 - - gmx:100170724 508.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00655 05 16004070 16006713 Cca05g00655 05 16004070 16006713 ECH