Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00654 ATGAAGTTTCACATTCTTCCCATTGTTACTTTTCTCATGGTTGTTATGGCAACTAATGCTGCATTACCTCCTGAATTTTACTGGAAGTCCATGCTTCCCACCACACCAATGCCGAAAGCCATCACTGATTTGCTACACCCTGAAAAGGGAAACCAAGGACAAGGAGGTGGCACTGATGTTAATGTTGGTGGAGGAAACGGTGGAGTGAATGTGCACACAGGCCCAAAGGGAAAGCCCGTGCATGTTGGAGTGGGCCCACACTCTCCATTTGATTACAATTATGCAGCCAGCGATAACCAATTACGTGATCACCCCAATGTGGCACTCTTCTTCTTGGAAAAGGACTTGCATCATGGAACAAAATTTAACTTACACTTCACTCACACCTTAAACGTTGATGCCACATTCTTGCCTCGCAAAATTGCTGACTCCATACCCTTTTCATCAAACAAGGTCAGTGACATACTCAACAAGTTCTCCATCACGCCAGGCTCAGATGAGGCTCAAACTGTTAAGAACACAGTGAGTGAGTGTGAAGAGCGTGGCATCAAAGGAGAGGAGAAGCGTTGCGTGACTTCACTCGAGTCCATGGTTGATTTCGCCACTTCCAAGCTCGGGAACAGTGTTGATGCTTTTTCCACGGAAGTGAGAAAAGAGAGCGAGTTTCAAGAAGAATACAGAATAGCAGGATCAGGGGTTAAGAAGTTGGGTGGGGAGAAGGGTGTTGTGTGCCACAAAGAGAGTTACCCTTATGCGGTGTTCTATTGTCACAAATCAGATAGCACCAAAGTTTATTCTGTTCCGTTGGAGGGTGCTGATGGAAGCAGAGTCAAAGCGGTTGCAGTGTGTCACACTAACACGTCACCTTGGAATCCCAAACATTTGGCTTTCAAAGTGCTTAAGGTTCAACCAGGGGCTGTTCCTGTTTGCCACTTTCTACCTCGGGATCATGTTGTCTTTGTTCCCAAGTAG 972 0.4619 MKFHILPIVTFLMVVMATNAALPPEFYWKSMLPTTPMPKAITDLLHPEKGNQGQGGGTDVNVGGGNGGVNVHTGPKGKPVHVGVGPHSPFDYNYAASDNQLRDHPNVALFFLEKDLHHGTKFNLHFTHTLNVDATFLPRKIADSIPFSSNKVSDILNKFSITPGSDEAQTVKNTVSECEERGIKGEEKRCVTSLESMVDFATSKLGNSVDAFSTEVRKESEFQEEYRIAGSGVKKLGGEKGVVCHKESYPYAVFYCHKSDSTKVYSVPLEGADGSRVKAVAVCHTNTSPWNPKHLAFKVLKVQPGAVPVCHFLPRDHVVFVPK 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00654 323 SMART BURP_2 108 323 IPR004873 -
Cca05g00654 323 PANTHER BURP DOMAIN-CONTAINING PROTEIN-RELATED 57 322 - -
Cca05g00654 323 PANTHER BURP DOMAIN-CONTAINING PROTEIN-RELATED 8 52 - -
Cca05g00654 323 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 57 322 IPR044816 -
Cca05g00654 323 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 8 52 IPR044816 -
Cca05g00654 323 Pfam BURP domain 109 322 IPR004873 -
Cca05g00654 323 ProSiteProfiles BURP domain profile. 110 323 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00654 Cca-Chr5 15979768 15983542 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00654 - - gmx:100272209 471.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00654 05 15979768 15983542 Cca05g00654 05 15979768 15983542 ECH