Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00650 ATGCAGAGTCTGCAACACAAGGCTTCGGAATGGAGCGGAATCGCCCTAGACGACGCCTTCGCCATCGACGACACCAATCTCTTCCAAAAACTCGGCCTCCAAACCTTCGTTAACCTCTCCACCAATTTCTACAACCGGGTGTACGGTGACGAGGAAGAGTGGTTTCGTTCGATATTCGCTGGCTCTCAGAAAGAAGACGCCATTCAAAACCAATACGAGTTCTTCGTCCAACGAATGGGTGGTCCTCCTCTCTTTTCTCAGAGGAGAGGACATCCTGCTCTAATTGGTCGACATCGACCGTTTCCGGTTACGCATCAAGCTGCAGAGAGGTGGTTACATCACATGCAACAAGCATTGGACAGTACTCCAGATATAGATGATGATTCAAAGACCAAAATGATGAACTTTTTCAGGCACACTGCATATTTTTTGGTGGCTGGAGATGAGCTGAAGAATCAAAACCAACAGATTCCATGCAAACATGCAGTCGGAAGGGATGGAAGGAATGGTTCATGA 516 0.4767 MQSLQHKASEWSGIALDDAFAIDDTNLFQKLGLQTFVNLSTNFYNRVYGDEEEWFRSIFAGSQKEDAIQNQYEFFVQRMGGPPLFSQRRGHPALIGRHRPFPVTHQAAERWLHHMQQALDSTPDIDDDSKTKMMNFFRHTAYFLVAGDELKNQNQQIPCKHAVGRDGRNGS 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00650 171 CDD TrHb2_AtGlb3-like_O 28 146 - -
Cca05g00650 171 SUPERFAMILY Globin-like 26 145 IPR009050 -
Cca05g00650 171 Gene3D Globins 1 151 IPR012292 GO:0019825|GO:0020037
Cca05g00650 171 PANTHER TWO-ON-TWO HEMOGLOBIN-3 1 158 IPR044203 GO:0005344|GO:0015671
Cca05g00650 171 Pfam Bacterial-like globin 26 142 IPR001486 GO:0019825
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00650 Cca-Chr5 15867671 15871197 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00650 - - gmx:100526931 315.849
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00650 05 15867671 15871197 Cca05g00650 05 15867671 15871197 ECH