Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00629 ATGGTTCCAAGCTTTGATTTTTCCAATAGGTGGATGAAGGGCACTCATAAGGGTACCCCTGTGGAGAACCCTACTTTCTCTGTTGTGGAGATTAATGGTGCTGATGCTGCAGCATTCAGGCCAGTGGAGAAAACACGTGGCAGGAATGCTAAGCAAGTAACATGGTTCTTGATTCTCAAGGCTTACCATGCTATTGGCTGTGTTACTTGGTTTGCCACAGTTATGTGGTCTTTGATGGGAGCTATAAGGAAGAGGTTGGTTCAAAGGGAGGGTGTGGCCTTGGAGAGTGACAAGTTGGAGAAAGGGAAGGTGCTGTTTAGGTTCATCAAGGTGTTCCTTGTGAGTTCTTTGGTGGTTCTGGTGTTTGAGGTGGTGGCTTACTTGCAAGGTTGGCACTTTGGGAATCCCTGCTTGCACATTCCTCGTGCTGCGGATTTCGAAGGCTTGATGCACTTGGTTTATGTTGCTTGGCTGAGGTTTCGTGGCGAGTACATTGCACCACCATTAAGGGCACTTTCGAAGTTTTGTGTTGTTTTGTTTCTTATACAGTCGGTGGACCGTATGGTGCTTTGCTTTGGGTGCTTTTGGATAAAGTACAAGAAGATCAAGCCAAGGATTGATGGGGATCCCCTCAAGGTTGATGATATTGAAGGAAATGCATGTAATCATCCCATGGTTCTTGTTCAGATTCCCATGTGTAATGAGAAGGAGGTGTATGAGCAGTCTATTTCTGCAGTATGCCAAATTGATTGGCCAAGGGACCGTTTACTGATTCAAGTACTTGATGACTCTGATGATGAGAGCATACAGTGGTTAATTAAGACTGAGGTCACAAAATGGAGTAAAAAGGGAATCAACATAATCTACAGGCATCGCTTAGTTCGGACTGGATATAAAGCAGGGAATCTCAATTCTGCCATGAGCTGTGACTATGTGAAAGACTATGAGTTTGTTGCGATTTTCGATGCAGATTTCCAACCAAATCCTGATTTCCTTAAGCAAACTGTGCCATATTTCAAGGACAATCCTGAATTAGGCCTTGTTCAAGCTAGATGGTCTTTTGTGAATAAGGATGAGAACTTGTTGACCCGTCTCCAGAACATTAACTTATGCTTCCATTTTGAGGTAGAACAGCAGGTCAATGGGGCATTTCTCAATTTCTTTGGATTTAATGGAACTGCTGGTGTTTGGAGAATCAGGACCCTAGAAGAGTCCGGCGGCTGGCTCGAGAGGACAACCGTAGAAGATATGGATATTGCTGTTCGTGCTCATCTCCATGGTTGGAAATTTATCTTTGTAAACGATGTAAAGGTACTTTGTGAAGTCCCCGAGTCCTATGAAGCATATCGGAAGCAGCAGCACCGCTGGCATTCCGGTCCAATGCAACTTTTCAGATTGTGTCTTCCAGCAATTTTGAGATCTAAGATATCAGCATGGAAGAAAGGAAATTTAATACTTTTATTCTTTCTGTTGAGAAAACTCATTCTTCCCTTTTACTCCTTCACCTTATTTTGCATAATTCTTCCTCTAACCATGTTTGTCCCCGAGGCGGAGCTTCCTCTATGGGTGATCTGCTATGTTCCTGTATTTATGTCGTTCCTCAACATTCTCCCTGCCCCAAAATCTTTTCCTTTTATAGTTCCATACCTTCTTTTTGAAAACACCATGTCTGTCACCAAATTCAATGCCATGGTCTCTGGACTCTTCCATTTGGGAAGTTCTTATGAATGGATTGTCACAAAGAAGGCTGGAAGATCATCCGAGTCTGATTTGGTAGTGGCCGCAGAAAGGGAGACCAAGTCAACGATAGAACAACAAAAGATCCATAGAGGAGCTTCTGACAGTGTTCTTGTTGATTCAAACCAATGCAAGGAACAAAAGGAAACAAGTGGAACACCTGTGAAGAAAGCTAACAAAATATATAAGAAAGAGTTGACTTTAGCATTCCTCCTTCTCACAGCTTCTGTTAGGAGTCTTTTGTCTGCACAAGGAGTTCACTTTTACTATCTTCTTTTCCAAGGGGTGACTTTCCTCCTTGTTGGTCTTGATCTAATTGGGCAGCAGATGAGCTAG 2073 0.4308 MVPSFDFSNRWMKGTHKGTPVENPTFSVVEINGADAAAFRPVEKTRGRNAKQVTWFLILKAYHAIGCVTWFATVMWSLMGAIRKRLVQREGVALESDKLEKGKVLFRFIKVFLVSSLVVLVFEVVAYLQGWHFGNPCLHIPRAADFEGLMHLVYVAWLRFRGEYIAPPLRALSKFCVVLFLIQSVDRMVLCFGCFWIKYKKIKPRIDGDPLKVDDIEGNACNHPMVLVQIPMCNEKEVYEQSISAVCQIDWPRDRLLIQVLDDSDDESIQWLIKTEVTKWSKKGINIIYRHRLVRTGYKAGNLNSAMSCDYVKDYEFVAIFDADFQPNPDFLKQTVPYFKDNPELGLVQARWSFVNKDENLLTRLQNINLCFHFEVEQQVNGAFLNFFGFNGTAGVWRIRTLEESGGWLERTTVEDMDIAVRAHLHGWKFIFVNDVKVLCEVPESYEAYRKQQHRWHSGPMQLFRLCLPAILRSKISAWKKGNLILLFFLLRKLILPFYSFTLFCIILPLTMFVPEAELPLWVICYVPVFMSFLNILPAPKSFPFIVPYLLFENTMSVTKFNAMVSGLFHLGSSYEWIVTKKAGRSSESDLVVAAERETKSTIEQQKIHRGASDSVLVDSNQCKEQKETSGTPVKKANKIYKKELTLAFLLLTASVRSLLSAQGVHFYYLLFQGVTFLLVGLDLIGQQMS 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00629 690 PANTHER - 10 690 - -
Cca05g00629 690 SUPERFAMILY Nucleotide-diphospho-sugar transferases 223 525 IPR029044 -
Cca05g00629 690 Pfam Glycosyl transferase family group 2 318 523 IPR001173 -
Cca05g00629 690 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 5-RELATED 10 690 - -
Cca05g00629 690 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 218 443 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00629 Cca-Chr5 14841198 14844316 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00629 1 690 Miscellaneous Gene Families AT4G31590 76.901 0.0 1075
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00629 - - gmx:100797495 1281.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00629 05 14841198 14844316 Cca05g00629 05 14841198 14844316 ECH