Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00619 ATGGCAACAAAAGCAAAAGGAAGTAATTTTGTTGGGAAGGAGAAAAAGGGCCCATCTTCAAATTCTCACATTACAACCACTAAAAGGATCATCAAACCATCCACAACTACTAACTCTACTAACAAGCCTAACTCAACCTCATCAAAGAAAAATATCCCCAACTATCTCAAGCCCACACTAACCTCACAACTTGATTCCCCCTCTTCAAAACAAATTAAGAGTGACTCTCCCAACAATAAGCCTTCTCTTAACAAGAGAAGATCTTTGGACAAACCACTTTCCTCTTCAACCTTGACAAAACAAATACAACCCTCAAACTCAACATTACATGATGCCCTTGTGTCTACTGGTTCAAGAGAGAGATCTACACCACGTAGATCTTCGATTGGTCTAGTTACTAGAAACACAAACCCTTCCAAACCCATTTCAGATACAACCTCAAAGATTCCTAGTATTAGAAAAACTAGGCCACTAGTCATAAAGAGCACCAAGAAAATTTCCCTTACTACTACTACTACTTTAAGCGCTAAGAAAAAATCTAATACGGATCATGTTTCTGTTAACTCAACAAACAAATCTGCTAAAGAAATTAAAAAAACATTAAATGTTGAAACTGAGCAAGTTAAGGAAGTTGCAACTCAAGAAGTTGAAGTCATAAAGGTGGAGAATAAAGAACGCAAAGTACATCAGGCTGAACATGTGACTGATATTTCACCTAATGTTGACTCTGAACATGATATTGAACATGTTCTTGGGGTTGATAACTCTGATCCATTCCAAAACCAAGTTGATGATGAGAGAATCATTTCTATAGTGTCAGAAGCAGAGGAAATAGAAAATGGGCCATTAGAAGAGAAAGCAAAAGACTATGAACATGAATTAGAGGATGATAAAATAAACCAAGATGAAGGAAGAAACATCAGTGAAAGTGATCACCAACATAAGCATTTTACAACTAAAGAAGGATTTGTTGTTAAAGATGAAGATGAGGTAATCATAATAGAAGATCACAAAAGTGAGAAAAACAATGAAAAAGAGGCAATGGAGGAAGAAAAGGAAGCATTTGAAGGAGTAGAAGAGGCCAAGGTTAAAGCAACACCATCAAAACAACAATTAGGAGAAAGGAAACAAAAGAATAAAGAGTCTCTATCTAATGATATGATTGAAGAAACTAGAGGCAAGCTTTTGGAGACAAGAAAGAACAAGGTGATGGCACTGGCTGGAGCATTTCAAACTGTCATCGATTATCAAACCACATCAAGATGA 1266 0.3633 MATKAKGSNFVGKEKKGPSSNSHITTTKRIIKPSTTTNSTNKPNSTSSKKNIPNYLKPTLTSQLDSPSSKQIKSDSPNNKPSLNKRRSLDKPLSSSTLTKQIQPSNSTLHDALVSTGSRERSTPRRSSIGLVTRNTNPSKPISDTTSKIPSIRKTRPLVIKSTKKISLTTTTTLSAKKKSNTDHVSVNSTNKSAKEIKKTLNVETEQVKEVATQEVEVIKVENKERKVHQAEHVTDISPNVDSEHDIEHVLGVDNSDPFQNQVDDERIISIVSEAEEIENGPLEEKAKDYEHELEDDKINQDEGRNISESDHQHKHFTTKEGFVVKDEDEVIIIEDHKSEKNNEKEAMEEEKEAFEGVEEAKVKATPSKQQLGERKQKNKESLSNDMIEETRGKLLETRKNKVMALAGAFQTVIDYQTTSR 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00619 421 PANTHER EMB|CAB62594.1 1 418 - -
Cca05g00619 421 MobiDBLite consensus disorder prediction 335 389 - -
Cca05g00619 421 PANTHER CALMODULIN-BINDING PROTEIN-LIKE PROTEIN 1 418 - -
Cca05g00619 421 Coils Coil 331 361 - -
Cca05g00619 421 MobiDBLite consensus disorder prediction 1 150 - -
Cca05g00619 421 MobiDBLite consensus disorder prediction 14 150 - -
Cca05g00619 421 Pfam Plant calmodulin-binding domain 310 414 IPR012417 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00619 Cca-Chr5 14535355 14538020 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00619 - - gmx:102666755 360.918