Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00604 aTGTCCGGGGTGTGGGTGTTCAAGAATGGTGTGTTTCGTTTGGTGGAAAACCCTCAAGCTGAGGCCTCGGATGGAAGACAAGGGAAGGGAAGTAGCTCAAAGAGAAAGGTGTTGGTTCACTTGCCAACAGGGGAAGTGGTGTCTTCCTATGCTTTTCTTGAGCAAATCTTAACTGGATTAGGGTGGGAGAGGTACTATGATGGGGACCCTGACCTCTACCAATTCCACAAACACTCTTCAATTGACCTAATTTCCCTCCCAAAAGATTTCTCCAAGTTCAACTCCATCAACATGTATGATATAGTCATCAAGAACCCCAATGTCTTCCATGTCAGGGATAAATCTGAAACAATTGTATTGCTGGAAACTCTTTTTCTCTTCCATTGGGTCGTTGGAGGCCTGATGCAAGAATTACGAACTACTCTCCTTGAGGATTGTCCCGAGGCCAAGATTGAAATCTTTTAG 465 0.4473 MSGVWVFKNGVFRLVENPQAEASDGRQGKGSSSKRKVLVHLPTGEVVSSYAFLEQILTGLGWERYYDGDPDLYQFHKHSSIDLISLPKDFSKFNSINMYDIVIKNPNVFHVRDKSETIVLLETLFLFHWVVGGLMQELRTTLLEDCPEAKIEIF 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00604 154 PANTHER FLOWERING-PROMOTING FACTOR 1-LIKE PROTEIN 2 1 113 - -
Cca05g00604 154 PANTHER FLOWERING-PROMOTING FACTOR 1-LIKE PROTEIN 1 1 113 IPR039274 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00604 Cca-Chr5 13855779 13862662 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00604 - - gmx:100527299 234.958