Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00600 ATGCTAAATGTGGGAGTTTGGATGATGCGGTTCGTGTGTTCAGGAACATGCCTAGGAGAGACACACAAGCCTGGTCGGCAATGCTTGTTGCTTATGCAACACATTGACATGGCTTACAAGCCATTGTTGGAAGAAATGAAGAAGGGCCATGAGGGCAAATTCTCTATTTATGTACATGCGTCAAAGGAAAAGCCAATACATGTCAGTCCCTATTTTGTTGGCCGAGACATTCGCAGTGAACCGGTAGTCTGGGGAAAAATTTCTATGGTTGAGGCAGAAAGGAGACTTTTGGCAAATGCACTTTTAGACCCTGATAACCAACATTTTGTCTTGTTGTCTGAAAGTTGTGTACCGGTGCGCCGCTTTGAATTTGTGTACAACTATTTATTATTAACAAATGTCAGCTTTATTGACTGCTATGTGGATCCTGGTCCTCATGGAAACGGAAGGTATATAGAACATATGTTGCCTGAAGTAGAAAAGAAGGATTTCCGAAAGGGTTCACAGTGGTTCTCAATGAAACGGCAGCATGCTATAATAATTATGGCAGACAATCTCTACTTTTCAAAATTCAGGCACCATTGCAGGCCAAATATGGAGGGAAACCGCAACTGCTATGCTGATGAGCATTACCTGCCAACGTTTTTTAATATGCTTGATCCAGGTGGAATTGCAAATTGGTCGGTAACATATGTTGATTGGTCTGAAGGAAAATGGCATCCAAGGTCATTCAGAGCTCGGGATATTACTTATCAAGTCATGAAAAACATAGCATACATTGACGAAAGTCCACATTTTACAAGTGATGCAAAGAGAACTATGGTGATTACACCTTGTGTATTGAACGGCTCAAAACGATCATGTTATCTATTTGCCCGGAAGTTTTTCCCAGAAGCTCAGGATAAATTGATCCAACTCTACACTAATTCTACGATATTCTAA 942 0.4098 MLNVGVWMMRFVCSGTCLGETHKPGRQCLLLMQHIDMAYKPLLEEMKKGHEGKFSIYVHASKEKPIHVSPYFVGRDIRSEPVVWGKISMVEAERRLLANALLDPDNQHFVLLSESCVPVRRFEFVYNYLLLTNVSFIDCYVDPGPHGNGRYIEHMLPEVEKKDFRKGSQWFSMKRQHAIIIMADNLYFSKFRHHCRPNMEGNRNCYADEHYLPTFFNMLDPGGIANWSVTYVDWSEGKWHPRSFRARDITYQVMKNIAYIDESPHFTSDAKRTMVITPCVLNGSKRSCYLFARKFFPEAQDKLIQLYTNSTIF 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00600 313 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 31 309 IPR044174 GO:0016757
Cca05g00600 313 PANTHER OS04G0607100 PROTEIN 31 309 - -
Cca05g00600 313 Pfam Core-2/I-Branching enzyme 36 257 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00600 Cca-Chr5 13756322 13764804 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00600 - - gmx:100788165 535.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00600 05 13756322 13764804 Cca05g00600 05 13756322 13764804 ECH