Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00595 ATGGCGGAGGAGAGAGAAGCCGCTCCCGATAACGCTGCAGAGAGCGATAGTAAGAAGAAGGAGAAGAAGCGAGGCTTCGTTTCGCGGATTTGGAACGCGATTTTCAGGTCTAGCGGCGACGATTTCGAGAAGAGGCTTCAGTATATTTCCAAGGAGGAGAACGTTGTTGTGGCCAGAATGAGTGCCAGATCTCGCACCTGGAGGCGAACCTCGCGCCAGCTTATTTTGTTCTCTGTTCTGTTTGAGGTCATTGCTGTAGGTTATGCTATTATGACGACAAGATCAATGGATTTGAATTGGAAAACGAGAGCAATCCGAGTTTTGCCAATGTTTCTTCTGCCTGCTTTGTCATCTGTTACATATTCAACATTTGTCAGCTTCACAAGGATGTGTGATCGCAGGGACCAGAAAATTCTTGAAAAGCTTAGAGCTGAAAGGAAGGCAAAAATTGATGAGCTCAAAGAGAAGACAAATTATTACATTATTCAACAACTCATTCAGAGATATGACACAGATCCAGCCGCAAAGGCAGCAGCAGCTACTGTTTTAGCATCCAAGTTGGGCGCAGATTCGGGATTGAAAGTGTATGTGGGGGATGAATCTTCTGGTGCTCCAACAGGGAAGACCAGGGATGTTGAAGTTGTGCAGTCTAGTGGACTTCGAAATCGCAAACAAGTGAACTCGTCCACTAGTCCAGGGACAACTACACCAAATAATTCTGATCAACAATTGGTTGGTTCTGGGAAAATTGATCAAACTCAAACTTCTGAGCATAATCAGCTTGTAGTCGTTGAACATCACGATCCTCGAAGTTCAAAAATGAATGATGGAGGATGGATTGCCCGAATTGCAGCATTGCTTGTTGGTGAGGATCCAACGCAGTCTTATGCGCTCATATGCGGTAACTGCCGTATGCATAATGGTCTTGCTCGGAAGGAGGATTTCTCATTTATTACTTATTACTGTCCACACTGTCACGCCCTTAACAAACCAAAGCAATCGGATGAGCGAATATCTGCTTTAAATTCCCCGAACACCGAGTCTCCAAAAACAGATGACAGTGAAGAAGTTAAAAATGCTAATGTTTCAGCAGCTGGCAGCGTAATCACAAGCAATAATCCCATAAAAGCTAGCCCTGAGATTGAAGAGGTATCTTCAAGGGAAGAAAGCTAG 1173 0.4442 MAEEREAAPDNAAESDSKKKEKKRGFVSRIWNAIFRSSGDDFEKRLQYISKEENVVVARMSARSRTWRRTSRQLILFSVLFEVIAVGYAIMTTRSMDLNWKTRAIRVLPMFLLPALSSVTYSTFVSFTRMCDRRDQKILEKLRAERKAKIDELKEKTNYYIIQQLIQRYDTDPAAKAAAATVLASKLGADSGLKVYVGDESSGAPTGKTRDVEVVQSSGLRNRKQVNSSTSPGTTTPNNSDQQLVGSGKIDQTQTSEHNQLVVVEHHDPRSSKMNDGGWIARIAALLVGEDPTQSYALICGNCRMHNGLARKEDFSFITYYCPHCHALNKPKQSDERISALNSPNTESPKTDDSEEVKNANVSAAGSVITSNNPIKASPEIEEVSSREES 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00595 390 MobiDBLite consensus disorder prediction 200 255 - -
Cca05g00595 390 Pfam Predicted integral membrane zinc-ribbon metal-binding protein 279 329 IPR019273 -
Cca05g00595 390 PANTHER INTEGRAL MEMBRANE METAL-BINDING FAMILY PROTEIN (DUF2296) 10 388 - -
Cca05g00595 390 MobiDBLite consensus disorder prediction 211 255 - -
Cca05g00595 390 PANTHER ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK 10 388 IPR040115 GO:0071786
Cca05g00595 390 MobiDBLite consensus disorder prediction 336 390 - -
Cca05g00595 390 MobiDBLite consensus disorder prediction 358 379 - -
Cca05g00595 390 MobiDBLite consensus disorder prediction 1 23 - -
Cca05g00595 390 Coils Coil 136 159 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00595 K23292 - gmx:100804882 625.165