Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00594 ATGGCCATGGATGCACAACAACACCAACAATCTTCAGAATTATCAGCAGAAGAAAATGAGAGAGAATCTGAGGACTTCAGAGAAAAGGGTCCACAAACTGGAACTGGGTCTCTCCCTAGTGGCTTCATTGGGAAACATAGGTTGCAAGCTGCCATAAACCACCTCAATAACCAAATTACCATTTTGGAGGAAGAATTGGAAAAACTTGAAACAATAGGTGAATCCTCCACCGTTTGCAAGGATGTAATTTCAAGCGTTGAATCCATTCCAGATCCTCTCCTTCCTTTTACTATAGGTTCGGTGGATGCTGGTTGGGATCGATGGTTCGGAGGTGCCCACCATTCTCGAAATCATAAACGTTGGATTTAG 369 0.4336 MAMDAQQHQQSSELSAEENERESEDFREKGPQTGTGSLPSGFIGKHRLQAAINHLNNQITILEEELEKLETIGESSTVCKDVISSVESIPDPLLPFTIGSVDAGWDRWFGGAHHSRNHKRWI 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00594 122 MobiDBLite consensus disorder prediction 14 29 - -
Cca05g00594 122 PANTHER GUANINE NUCLEOTIDE-BINDING PROTEIN SUBUNIT GAMMA 1 10 122 IPR045878 -
Cca05g00594 122 PANTHER GUANINE NUCLEOTIDE-BINDING PROTEIN SUBUNIT GAMMA 2-LIKE 10 122 - -
Cca05g00594 122 Coils Coil 45 72 - -
Cca05g00594 122 MobiDBLite consensus disorder prediction 1 42 - -
Cca05g00594 122 Pfam GGL domain 55 109 IPR015898 GO:0007186
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00594 Cca-Chr5 13631975 13633046 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00594 K24772 - gmx:100798973 187.578