Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00589 ATGGCTGCCACGGTGAAACAAATGGCGTTGATCGTGTCTCTGTTGGGCCTCGTGTCTTTCATTTTGGGGGTTGTTGCTGAAAACAAGAAGCCTGCGGCTGGAACACCTGTGCCTGGTGTGGATGGTATCTCTGTCACCTGCAAGTATCCAGCTGATCCAACTGTTGCACTGGGGTATCTTTCTACAGCATTTCTTGTTGCATCCACTGTGGTTGGGTATCTGGCTTTGTTTTACCCTTACAAAGGAAAATCTATTCCACAAGGAGTTCTGTTTAAACACACCACTTTCACAGTTTTCTTCAACATTGCTTTGTTCACCACTGGATTAGCTGCAACATTGTTGTTATGGCCAACGATCACCGAACAGCTTCACCTGACGCGCAATGTGCACCGTGATATGAGCTATGAATGCCCTACAGCTAAAACTGGTCTCCTTGGAGGTGGTGCCTTTTTGTCCCTTGATTCATCTCTACTTTGGTTGATTACCCTTATGTTAGCTGGCAATGCGCGAGAGGATTTCTTTgaagaagaagaagaagaTGGTGATAAGGGCGAATTTGGTGCAGTGTCCTCCAATGCTTATTATGATGATGATGGAGTAAAGGGTAGTGCCTGA 615 0.4488 MAATVKQMALIVSLLGLVSFILGVVAENKKPAAGTPVPGVDGISVTCKYPADPTVALGYLSTAFLVASTVVGYLALFYPYKGKSIPQGVLFKHTTFTVFFNIALFTTGLAATLLLWPTITEQLHLTRNVHRDMSYECPTAKTGLLGGGAFLSLDSSLLWLITLMLAGNAREDFFEEEEEDGDKGEFGAVSSNAYYDDDGVKGSA 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00589 204 Pfam Protein of unknown function (DUF1218) 60 156 IPR009606 -
Cca05g00589 204 PANTHER OS05G0465400 PROTEIN 1 194 - -
Cca05g00589 204 MobiDBLite consensus disorder prediction 175 204 - -
Cca05g00589 204 PANTHER OS07G0462200 PROTEIN-RELATED 1 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00589 Cca-Chr5 13557264 13560734 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00589 - - gmx:100811286 348.206