Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00578 ATGGAGGAGCAATTCATACTTCGTGTTCCACCTAATGTGGCAGAGCGGATAGAGCGTCTTCTGAATGAAAGCAATCCTTCTTCGTCTGAAGACAAGTCATTAGATTTGTCATTTAGTGAGGATGGAAGAAGCGGTACATTTGTGATTGGGAATGAACACTTCCCAGCTTCTCTATTGGACCTTCCTTGCGTTGTTGAATCTTATAAGACTTATGATGATAACTCTTTGATTAAGACTGCGGATGTTGGTCAGATGATTATGGTGAGGGAATCTGGTGATGCTGCTCCAGATGTAATTGAGTACAGACATGGCCTCACCCCACCCATGAGAGATGCTCGCAAGCGTCGATTTCGCAGGGAGCCTGATCTTAATCCTGAGCTTGTCTCTCGAGTTGAGAAAGATCTTCTCAAAATCATGGCTAGAGGAACTGCTGACAATCTTGATGTAGAAGCAGCTGAGCAAGAAGAAGGCGATGAGAATGCCCGAGGCACTAACAAAAAACCTGCACCAAAGCCTGCACCAAAACATGATGCTCCAGAGAATCTTGCTAATGCAGGGGAACCTGACAGGAGTGATTCTGAGGAATCTGATGACTCAGTCTGA 603 0.4527 MEEQFILRVPPNVAERIERLLNESNPSSSEDKSLDLSFSEDGRSGTFVIGNEHFPASLLDLPCVVESYKTYDDNSLIKTADVGQMIMVRESGDAAPDVIEYRHGLTPPMRDARKRRFRREPDLNPELVSRVEKDLLKIMARGTADNLDVEAAEQEEGDENARGTNKKPAPKPAPKHDAPENLANAGEPDRSDSEESDDSV 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00578 200 MobiDBLite consensus disorder prediction 146 200 - -
Cca05g00578 200 PANTHER TAF7 RNA POLYMERASE II, TATA BOX-BINDING PROTEIN (TBP)-ASSOCIATED FACTOR 1 199 - -
Cca05g00578 200 SMART TAFII55_N_2 1 146 IPR006751 GO:0005669|GO:0006367
Cca05g00578 200 CDD TAF7 2 156 IPR006751 GO:0005669|GO:0006367
Cca05g00578 200 Pfam TAFII55 protein conserved region 1 140 IPR006751 GO:0005669|GO:0006367
Cca05g00578 200 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 55 KD SUBUNIT-RELATED 1 199 IPR037817 GO:0005669
Cca05g00578 200 MobiDBLite consensus disorder prediction 156 174 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00578 K03132 - gmx:100782843 346.28