Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00559 atgggtagtgagggtgagaatgaaagtgagaTAATTCCATGTCTGAAATTTTTGGGGGATTTCAAAGAGGGGAGTGAGGAATGGAAAGAGTTGAGCAAGAAAGTGAGAGAAGCATGTGAAAGGCATGGTTGCTTCATCTTAATTAATGACATGGTTCCAAAGGGTCTACGTGATGATATGTTTCTATGCATGAAAGAGTTGTTTGATTTGCCTGAAGAAACCAAGAGAAAGCACATAAGCCCAAAGGCTTATAGGAGCTACAATTGTGATTGCCCCCTTGTTACTCTCTGTCAAAGCTTTGGGATTGATGATGTTCCAATCTCAGATTCTGCTCATGCCTTCACTAACCTCATGTGGCCTCGAGGAAACCCCTCTTTCTGTGACACATTGAACTCCACGAGCTCCAAGATGTTCGAACTGACTTTCATGATTCTGAAGATGATTCTAGAAGGTTATGGCCTTCCAAAGCAATACACTTCGGATATTGAAGAAATGAAGAGCTCTAGTAATTTTCGATTGATTAAGTACATAGTTCCCCAAAACGATGAAGTTTGTGAAATTGGCTTGTTGCCTCACACCGACAAAAGTGCCCTAACCATTTTATGCGAAAATGAAGTGCAAGGTCTTGAGGTGCTAACCAAAACAAACAAATGGATTCCTTTGAAGATACCTCAAGAAGGCTTTGTGGTCCTTGTTGGTGACATATTAAAGGCATGGAGCAATGGGAGACTTGATGCGGCTACACACAGAGTGATGATGAAAGGAGAAAAAGAAAGATATTCCTTTGCACTATTTTCAGTGCCAAAAGAAGAGGTGAAGATCGAGGTGCCCCCTGAGTTGGTGGAGGATAATATGTACCCTCTACGCTACAAGCCTTTCAATTATGGGGAATACTTTAAGTACTTTGTTTCAACTCTCAAGGAAAATGCATTAGATGTGTTTGCTGGTGTTTAA 954 0.3962 MGSEGENESEIIPCLKFLGDFKEGSEEWKELSKKVREACERHGCFILINDMVPKGLRDDMFLCMKELFDLPEETKRKHISPKAYRSYNCDCPLVTLCQSFGIDDVPISDSAHAFTNLMWPRGNPSFCDTLNSTSSKMFELTFMILKMILEGYGLPKQYTSDIEEMKSSSNFRLIKYIVPQNDEVCEIGLLPHTDKSALTILCENEVQGLEVLTKTNKWIPLKIPQEGFVVLVGDILKAWSNGRLDAATHRVMMKGEKERYSFALFSVPKEEVKIEVPPELVEDNMYPLRYKPFNYGEYFKYFVSTLKENALDVFAGV 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00559 317 SUPERFAMILY Clavaminate synthase-like 12 305 - -
Cca05g00559 317 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 166 268 IPR005123 -
Cca05g00559 317 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 7 316 - -
Cca05g00559 317 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE AOP1-RELATED 7 316 - -
Cca05g00559 317 Pfam non-haem dioxygenase in morphine synthesis N-terminal 21 88 IPR026992 -
Cca05g00559 317 Pfam 2OG-Fe(II) oxygenase superfamily 172 265 IPR044861 -
Cca05g00559 317 Gene3D - 14 314 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00559 Cca-Chr5 12826489 12835885 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00559 12 298 Glycosyltransferase AT5G59530 23.129 8.15e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00559 - - gmx:100817159 420.239