Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00556 ATGGCAACAGAAGTAAGTTATATTTGCAAAAGAACCGTGGTGAGCACCAAGGCAGTGGAGCCAGGAAGGTTCTTCCCCTTATCAGTTTTGGACCATCACATGGAGAAGAACCACATAAGGATGGTGTACTATTACCAAACATCAAGAGAAGTTGAAGTTGGAGGAGTGACCAAGAAGTTGAGAGAGAGCTTGTCAGAGATGCTCACCCATTTTCCCATAGTGAGTGGAAGGTTGGTAAGAGATGATGAGAGAGGGCATTGGAAGATCAAGTGCAATGATGCTGGGGTTAGAATGGTGGAGGCCAAAGCCAAGGGGAGTGTGGAAGGGTGGCTAACAAACCTTGATAGGGAAAAGGAACTCCAACTTGTGCATTGGGAGGAAATGTTTCATAAGCCTTACTATTGGTCCACCTTTTATGTCCAGTTGACTGAATTTGAAGAAGGTGGACTAGCAATTGGTCTTAGTTGCATTCATCTCTTGGCAGATTCCACATGTGCAACCACATTCATGAAAGCTTGGGCTGACATTTCATTGTGCAACAAAATGATTACTCCTCCACTATTCCACCCTTTACCTCCTCCAAGACCAAGAAATAGAAACCCTAATCATCACCCCCACATGGAATTAATACATCACTACAAATCCTTAATTGAGAAACCCATTGCTTTGAAAGATGTAAGGTACACTACCATTTCCCTGGGCTTCTCAGACCACATGGTCCAGGCTTGCATGTCCATGGTCCAACCCAATGGCCCAATAACACCATTTGAGGCACTAACAACATTGTTTTGGGTCTCTTTGAGCAAAATCAAGGGATTGGGAAATGGGCTTGTTGACATGTCCATATGTTTGGACATGAGAAAAGTGTTAGGCCTAGATTATGGATTCTTTGGAAATTGCATGGTGTATAATAAGGTGCATGTAGAAGGTAACAAATTTCCACAAGTTGTTAAAGCCATAAGTGATGTTGTGACTAAGATGAATAGTGAGGGAATCATGGATCTAATCGAGTGGCTAGAAAACAATGATACAAGTTCACTTACCATGATGAACGGTCACGATTTGGTTTGTGCTAGCTTAGAGGGTGTGGACCCTTATTTAGCTGTGTTTCAAGATTGGTTCAAACCCATTCATGTTTCATATTATGTGGAACCTGTTTTGGGAGAAGGGCAAGTTTTGATTCTCCCTGGCAAACAAGGGGAGGGTCCCTTAAGCAGGGTGGCCATGGTGACACTTAGGGAAGAGGAAGCAATTAAGCTTTGTGAAGATGATGTCATTTCACAATTCTCTCCCTCTATCTTGATGAAATGTCAATAA 1317 0.4267 MATEVSYICKRTVVSTKAVEPGRFFPLSVLDHHMEKNHIRMVYYYQTSREVEVGGVTKKLRESLSEMLTHFPIVSGRLVRDDERGHWKIKCNDAGVRMVEAKAKGSVEGWLTNLDREKELQLVHWEEMFHKPYYWSTFYVQLTEFEEGGLAIGLSCIHLLADSTCATTFMKAWADISLCNKMITPPLFHPLPPPRPRNRNPNHHPHMELIHHYKSLIEKPIALKDVRYTTISLGFSDHMVQACMSMVQPNGPITPFEALTTLFWVSLSKIKGLGNGLVDMSICLDMRKVLGLDYGFFGNCMVYNKVHVEGNKFPQVVKAISDVVTKMNSEGIMDLIEWLENNDTSSLTMMNGHDLVCASLEGVDPYLAVFQDWFKPIHVSYYVEPVLGEGQVLILPGKQGEGPLSRVAMVTLREEEAIKLCEDDVISQFSPSILMKCQ 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00556 438 Pfam Transferase family 8 416 - -
Cca05g00556 438 Gene3D - 218 422 IPR023213 -
Cca05g00556 438 Gene3D - 1 211 IPR023213 -
Cca05g00556 438 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 1 436 - -
Cca05g00556 438 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00556 Cca-Chr5 12481151 12483701 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00556 5 423 Acyl Lipid Metabolism Gene Families AT4G24510 25.814 1.93e-25 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00556 - - gmx:100804090 727.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00556 05 12481151 12483701 Cca05g00556 05 12481151 12483701 ECH