Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00554 ATGGTTGGTGAAGGAGAAAAACCAAAGGCAGTGATTGTTGGAGGAAGCATAGCAGGGATATCAAGTGCACATGCCCTTACCTTAGCTGGTTGGGATGTCCTTGTGCTTGAGAAAACCACCTCACCTCCAACTGGAAGCCCCACTGGTGCAGGTCTTGGACTCAACTCTTTCTCCCAACAAATCATTAACTCATGGCTTCATAACTCACAACAACTCCTACACAACACCACTTTACCACTCACCATTGACCAGAACCATGCAACTGATAGTGAGAAGAAGGTTAGCTGCACATTGACAAGAGATGAGAGTTTTAATTTCAGAGCAGCACATTGGGCTGATCTTCATGGCCTTTTGTACAATGCATTGCCATCAAATGTATTTTTATGGGGTCACCTTTTTCTCTCTTTCCATGTTGCTGATGATAAGGGTTCTGTCATAGTAAAGGCTGAGGTTCTAGAAAGTGGCAAGGTTATAGAGATAGTAGGGGATTTGCTTGTTGCAGCAGATGGTTGTCTCTCTTCCATCCGCCACAAATATCTCCCTCATTTTAAACTCAGATATTCAGGCTATTGTGCATGGAGAGGGGTTCTTGATTTTTCAAAAATTGAGAATTCAGAAACCATTATTGGTATGAGAAAGGCATATCCTGATCTAGGAAAATGCTTGTACTTTGACTTGGCCTCAGGTACACACAGTGTGTTGTATGAGCTGCTGAACAAAAAGCTCAATTGGATTTGGTATGTGAATCAGCCAGAGCCTGAAGTCAAGGGAACATCAGTGACAATGAAAGTAAACAGTGACATGATCCAAAAGATGCACCAAGAAGCAGAAAAAGTTTGGATTCCTGAGTTGGTAAAGGTCATAAAAGAAACAAGGGACCCTTTCTTAAATTTCATATATGATAGTGATCCTTTAGAGAAGATATTTTGGGACAATGTGGTATTGGTAGGAGATGCAGCTCACCCTACAACTCCTCACTGCCTTAGAAGCACAAACATGTCAATATTAGATGCAGCAGTGTTAGGCAAATGCCTTGAGAAGTTTGGAGCAGAAAAAGTGAGATCAGCTTTGGAAGAATATCAGTTCATTAGACTACCAGAAACTTCAAAGCAAGTTCTTCATGCAAGGCGTCTAGGTCGTATAAAACAAGGTTTGGTTGTGCCTGATAGAGAACCCCTTAACCCCAAATCAGCCAAGAAAGAGGACTGTGAGGAACTTCTACAAAGCAACACTCCTTTTTTCAATGATGTGCCTTCGATACTTGCTTCAATTCTTCCCCAAGTTGATTGCCTATAG 1296 0.4174 MVGEGEKPKAVIVGGSIAGISSAHALTLAGWDVLVLEKTTSPPTGSPTGAGLGLNSFSQQIINSWLHNSQQLLHNTTLPLTIDQNHATDSEKKVSCTLTRDESFNFRAAHWADLHGLLYNALPSNVFLWGHLFLSFHVADDKGSVIVKAEVLESGKVIEIVGDLLVAADGCLSSIRHKYLPHFKLRYSGYCAWRGVLDFSKIENSETIIGMRKAYPDLGKCLYFDLASGTHSVLYELLNKKLNWIWYVNQPEPEVKGTSVTMKVNSDMIQKMHQEAEKVWIPELVKVIKETRDPFLNFIYDSDPLEKIFWDNVVLVGDAAHPTTPHCLRSTNMSILDAAVLGKCLEKFGAEKVRSALEEYQFIRLPETSKQVLHARRLGRIKQGLVVPDREPLNPKSAKKEDCEELLQSNTPFFNDVPSILASILPQVDCL 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00554 431 SUPERFAMILY FAD-linked reductases, C-terminal domain 186 301 - -
Cca05g00554 431 Gene3D - 9 390 IPR036188 -
Cca05g00554 431 SUPERFAMILY FAD/NAD(P)-binding domain 8 383 IPR036188 -
Cca05g00554 431 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 - -
Cca05g00554 431 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 161 176 - -
Cca05g00554 431 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 310 325 - -
Cca05g00554 431 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 325 341 - -
Cca05g00554 431 PANTHER MONOOXYGENASE-LIKE 6 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00554 Cca-Chr5 12466583 12469956 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00554 - - gmx:100811757 747.273