Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00549 atgccggggaagacagagccactgtcagagaggatagatcggcggagattcgtcggagaggagaggagactcgcggaggTGTCGCGCGGAGAGGAAAGGAGACGCGCGGAGGTGTCGCGCGAAGGAGGTGAGGCGCGAAGGAGGAGAGCCGTGGAAGAGGCGCTGCGGAGGTCTGGAGTGGAGAGGAGAGTAGGAGAGGTCTGTctcgcgagtttacacgagtttacccgagttcaccgagatcgctccgagttcactaaaaaacgagtttacctccgagttgtacagGATTGTTCTGGGACTAGAGATCCCCATGGAGAGCCCCTGGTGACCAGTTATAATAGGCGCTTCTTGGGAACTGTTGACTACATTTGGCGATCTGAAGGTCTTCAAACAACCAGAGTTCTTGCTCCGATGTCTAAACTTGGCATGGAATGGACTCCGGGATTCCCAACAAAGAAATGGGGCAGTGATCATATTGCTTTGGTTACCGAGTTGGCTTTCTTGAGAGATGGTACCGACATCAGCAACAATGTCAAATAG 543 0.3702 MPGKTEPLSERIDRRRFVGEERRLAEVSRGEERRRAEVSREGGEARRRRAVEEALRRSGVERRVGEVCLASLHEFTRVHRDRSEFTKKRVYLRVVQDCSGTRDPHGEPLVTSYNRRFLGTVDYIWRSEGLQTTRVLAPMSKLGMEWTPGFPTKKWGSDHIALVTELAFLRDGTDISNNVK 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00549 180 MobiDBLite consensus disorder prediction 27 47 - -
Cca05g00549 180 Gene3D Endonuclease/exonuclease/phosphatase 46 178 IPR036691 -
Cca05g00549 180 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 94 169 - -
Cca05g00549 180 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 6 94 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00549 Cca-Chr5 12412567 12414440 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00549 - - gmx:100810446 165.622