Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00544 ATGAAGAAGGGAAGGTTCATGCTTCTGTCGGTGCTCTTATGTGCCACCTTTCATGTCTCCTTCTCCATTATCGACGGTCTGGTAGCGAACGGGAACTTCGAGTTGGGGCCAAAGGCGTCGGATCTGAAAGGAACGGAGGTGATCGGCGGAAGGCACTCGATCCCGGAGTGGGAGATCTCAGGGTTCGTGGAGTACATAAAGTCAGGTCAGAAGCAGGGCGACATGCTGCTGGTGGTGCCGGAGGGGGCGTACGCGGTGAGGCTGGGCAACGAGGCCTCCATCAAGCAGACGCTGAGGGTCACCAAGGGCATGTACTACTCCATCACCTTCATGGTCGCTCGCACCTGCGCCCAGGAGGAGAGCCTCAACATCTCCGTCACGCCTGACTGGGGCCTCATCCCCATTCAGACGCTCTACACCAGCAGCGGCTGGGACCCCATCGCCTTCGGCTTCAGAGCCCTCTCTCAGACCGTCCAGATGCTCATCCATAACCCCGGCAAGGAGGAGGACCCCGCCTGCGGTCCTCTCATCGACTCCGTCGCTCTCAGGACTCTCTACCCTCCCAGACCCACCAACAAGAACCTATTAAAGAATGGAGGGTTTGAAGAAGGACCCTATGTGTTTCCCAACTCATCATGGGGTGTGATCATCCCCCCAAACATAGAGGACGACCACTCTCCCCTCCCAGGGTGGATGGTGGAGTCCCTGAAGGCAGTGAAGTACATAGACTCAAACCACTTCTCAGTCCCTCAAGGCAAAAGAGCCGTGGAGCTAGTAGCGGGAAAAGAGAGTGCCATTGCTCAAGTGGCCAGAACCATCCCCGGCAAAACCTATGTTCTTTCATTCTCCGTTGGAGACGCAAGCAACTCCTGCGAAGGCTCCATGATCGTCGAAGCCTTCGCAGGCAAAGACACCATCAAGGTGCCTTACCAGTCCAAGGGCAAAGGAGGCTTCAAACGTGCTGCCCTAAAGTTTGTGGCGGTTAGCCCTAGGACACGCGTCATGTTCCTTAGCACATTCTACGCCATGAGAAGCGATGACTTCTCTTCTCTTTGCGGGCCTGTGGTTGATGATGTCAAGTTGGTGAGTCTGCGTAAGCCATGA 1104 0.5607 MKKGRFMLLSVLLCATFHVSFSIIDGLVANGNFELGPKASDLKGTEVIGGRHSIPEWEISGFVEYIKSGQKQGDMLLVVPEGAYAVRLGNEASIKQTLRVTKGMYYSITFMVARTCAQEESLNISVTPDWGLIPIQTLYTSSGWDPIAFGFRALSQTVQMLIHNPGKEEDPACGPLIDSVALRTLYPPRPTNKNLLKNGGFEEGPYVFPNSSWGVIIPPNIEDDHSPLPGWMVESLKAVKYIDSNHFSVPQGKRAVELVAGKESAIAQVARTIPGKTYVLSFSVGDASNSCEGSMIVEAFAGKDTIKVPYQSKGKGGFKRAALKFVAVSPRTRVMFLSTFYAMRSDDFSSLCGPVVDDVKLVSLRKP 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00544 367 PANTHER PLANT/F18G18-200 PROTEIN 7 367 - -
Cca05g00544 367 PANTHER OS02G0527500 PROTEIN-RELATED 7 367 - -
Cca05g00544 367 Pfam Protein of unknown function (DUF642) 26 183 IPR006946 -
Cca05g00544 367 Pfam Protein of unknown function (DUF642) 194 361 IPR006946 -
Cca05g00544 367 Gene3D - 190 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00544 Cca-Chr5 12268128 12274827 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00544 - - gmx:100813910 691.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00544 05 12268128 12274827 Cca05g00544 05 12268128 12274827 ECH