Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00493 ATGGGGTGTGGCAATTTGTTCTTCACGATTCTGATAACCTTCTCAGTGGCCCTGATAACATACAACATCATCATCTCAGCGAATGCCCCTCTGAAGCAAGACTTTCCAGGGCCTTCTCGCCCTTCAATTAAGGTGGATCCCCTCATCAAGATGCCACTCCACAGATCATCATCTTCTGAGGCCAAGAAGAGGCTTTTCCACACTGCGGTCACTGCCTCTGACTCTGTCTACAACACGTGGCAGTGCAGAGTAATGTACTTTTGGTACAACAAGTTCAAGGATGGGCCTGATTCTGGGATGGGTGGCTTCACTCGGATCCTTCACTCTGGGAAGCCTGACCAGTTCATGGATGAGATCCCCACCTTTGTTGCTCAGCCTCTGCCTGCTGGCATGGATCAGGGTTACATTGTCCTTAATAGACCATGGGCATTTGTACAGTGGCTTCAACAAGCAGATATCAAAGAAGATTACATATTGATGGCAGAGCCAGATCATATAATTGTCAAACCTATACCCAACTTAGCCAGAGATGGGCTAGGAGCTGCATTCCCTTTCTTTTATATTGAGCCTAAGAAGTATGAAACAGTGCTAAGGAAGTATTTCCCCGAGGAGAAGGGACCAATAACCAATATTGATCCAATTGGGAATTCACCTGTTATTGTTGGGAAGGAATCACTTAAGAAGATTGCTCCCACTTGGATGAATGTTTCCCTGGCAATGAAGAAAGATCCTGAAACCGATAAAGCTTTTGGATGGGTGCTTGAAATGTATGCTTATGCTGTTGCATCTGCTCTTCATGGTGTTGGAAACATATTATACAAGGACTTCATGATTCAGCCTCCATGGGACAAAGAAATTGGCAAGACATACATAATTCACTACACTTATGGTTGTGACTATTCAATGAAGGGTGAGCTAACCTATGGAAAGATTGGAGAATGGAGGTTTGATAAAAGATCTTATGATAAAGTTGCTCCTCCAAAAAATCTGACATTGCCGCCACCCGGTGTTCCAGAAAGTGTGGTGACTCTCGTAAAAATGGTGAATGAGGCTACAGCAAGTATTCCAAATTGGTGGTCATAG 1083 0.4423 MGCGNLFFTILITFSVALITYNIIISANAPLKQDFPGPSRPSIKVDPLIKMPLHRSSSSEAKKRLFHTAVTASDSVYNTWQCRVMYFWYNKFKDGPDSGMGGFTRILHSGKPDQFMDEIPTFVAQPLPAGMDQGYIVLNRPWAFVQWLQQADIKEDYILMAEPDHIIVKPIPNLARDGLGAAFPFFYIEPKKYETVLRKYFPEEKGPITNIDPIGNSPVIVGKESLKKIAPTWMNVSLAMKKDPETDKAFGWVLEMYAYAVASALHGVGNILYKDFMIQPPWDKEIGKTYIIHYTYGCDYSMKGELTYGKIGEWRFDKRSYDKVAPPKNLTLPPPGVPESVVTLVKMVNEATASIPNWWS 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00493 360 PANTHER HYDROXYPROLINE O-ARABINOSYLTRANSFERASE 1 1 359 - -
Cca05g00493 360 PANTHER PEPTIDYL SERINE ALPHA-GALACTOSYLTRANSFERASE 1 359 IPR044845 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00493 Cca-Chr5 10991392 10996946 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00493 K20782 - gmx:100813136 721.85