Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00489 ATGTCGGTGTCTGTAGAGCGCGAAATTGTGTCGTTTCGGGATTCTGACACTCGGAGCAATCTTCGAAGAATTCTTGAGTCATGCTCTAAATTGGCAGAGGCTGGAGATTTTCATGAGTCTGAAAAGTCAGTTTCAGAGCTTATTAAGTTTCTTGATTCTTTGCTGGATGCTGCTGGGTCTGACCCAGACAGTGATAATGCAGAGAATGTTGCATTTGAAGCTATCTCTGAGATCCATAGATATGTTTGTTCTCCTTCTCTTGACCAGGAAGTTGTTGATGCCCTTTCCTTTGAACTGCCAAAGGCTATTTCAAAGTTTGTGGTGGTTTCAAGTAAATTTTTGGACATGGCAATTAGCATCATCGATCAGTTTATTGAGAAATGTGGTCCAAGGGATATGCTCTCGATTCTCTGTAACACATTAGGTTACTCAAGTAAGATGACCAAGGCTTCCAGTTACATTCTCCCTCCTTTATCGGGGCTTTCTAAGGTCTTTATTTCAATTCAGAGACGTCAGTTTGAGCATATAAAAGAAGCTGTTCCTATAATTCTGAATGTATTGAAGGCTGTGTCATTGGAGTCAGAAGATGATGAACTTGAGGATGTGTTTGACAGAGCTGTTGATATTGCAAATTCTATATATGAAGTTTGTAATAAGTTGGAGAGGGATGCAAAAGAGAAACTCCGAGATCTTCTTGGCCTATATGTCCTGCAATGCATGGCTCTTGTTTCAGCTGGCATAAGCTATAAAGCTTCCAGTTGCCCTTCTTTGGTATTACAATTGTCACAAATTTCTTCATATTGTGGTTTATCATATCTCAGTCTATTAACAACTTATGATGTAGAGACTGTTGCTGGCTCTGTGTTTGGAGAAGATAAAGATCACTGTACTGGTTGTTTATCCCACGTCAAACATGGTGCTGCTCTTTCAGTAATTTGGGGGCATGTCTCAGAGGGGGTTGCTCATACTGCTAAAGAGGATTTGATTGCCATCCAGGATGAACTTCGTAATAACCAAACAAAAAGGTGGCAAGCAATAGGAACATTAAAGCATGTACTTTCCTTTGTAAATCTCCCATGGGAGTTAAAGAAACATGCTACCGACTTCTTGCTTTGCATCACAGATGGAGATGTCTCTGGAAACTACAATGAAGAACATTCTGAATGGTCATCTTATATGCCAAGTCTTTTCTCGGCTTTGCAGGCTGTAAAAATGGTTATCATGTATGCCCCAGAGCCAGAACTTAGAAAAAAATCCTTTGCTGTGTTAAAAGGAGTACTTGCTGATATTCCAATTTCTGAAAGATTTGACATTTTGAAAGCGTTGATTACAAATACCGACTCTTCCTCAATGATCGCCATTTTCATCGATCTTGTCAGGAAGGAAATGCATACAACAATCTGCAGTAGTAGATCAATAGTAAAAACTGCCCAGCAGATAGATAACAAAGCGTTTCCAGATACATCATTTTGGAATCCAAGTGTCCTTGAGTTGGTGGAGTTGGTTCTAAGACCTCCACAGGGTGGACCTCCTTCCCTGCCTGAGCAGAGTGATGCGGTGTTGTCAGCCCTCAACCTATACAGATTTGTATTGATGACAGAATCTGCAGAAAAGACAAACCACACTGGAGTGCTGTCAAGGAACAGTTTAGTGAAGGCCTACGATGAATGGTTGCTACCTTTGCGTACCTTAGTGACAGGCATAATGGCAGAGAGCAAGAGTGATTATGATGAGTTTGCAGTTGACATTGAATGCACCCTAAATCCACTTGAGTTGGTGATGTACCGGTGCATTGAACTTGTAGAAGAGAAGCTAAAGCAATCCACATAA 1830 0.4087 MSVSVEREIVSFRDSDTRSNLRRILESCSKLAEAGDFHESEKSVSELIKFLDSLLDAAGSDPDSDNAENVAFEAISEIHRYVCSPSLDQEVVDALSFELPKAISKFVVVSSKFLDMAISIIDQFIEKCGPRDMLSILCNTLGYSSKMTKASSYILPPLSGLSKVFISIQRRQFEHIKEAVPIILNVLKAVSLESEDDELEDVFDRAVDIANSIYEVCNKLERDAKEKLRDLLGLYVLQCMALVSAGISYKASSCPSLVLQLSQISSYCGLSYLSLLTTYDVETVAGSVFGEDKDHCTGCLSHVKHGAALSVIWGHVSEGVAHTAKEDLIAIQDELRNNQTKRWQAIGTLKHVLSFVNLPWELKKHATDFLLCITDGDVSGNYNEEHSEWSSYMPSLFSALQAVKMVIMYAPEPELRKKSFAVLKGVLADIPISERFDILKALITNTDSSSMIAIFIDLVRKEMHTTICSSRSIVKTAQQIDNKAFPDTSFWNPSVLELVELVLRPPQGGPPSLPEQSDAVLSALNLYRFVLMTESAEKTNHTGVLSRNSLVKAYDEWLLPLRTLVTGIMAESKSDYDEFAVDIECTLNPLELVMYRCIELVEEKLKQST 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00489 609 PANTHER GLOMULIN 19 608 IPR019516 -
Cca05g00489 609 Pfam Uncharacterised protein family, YAP/Alf4/glomulin 395 576 IPR013877 -
Cca05g00489 609 Pfam Uncharacterised protein family, YAP/Alf4/glomulin 88 257 IPR013877 -
Cca05g00489 609 Gene3D - 3 291 IPR011989 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00489 K23345 - gmx:100817784 1012.29