Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00468 ATGCAGGAGGAGGAAAATCAGGAAGATCCATGTGGTGAATCTATGGAGGAAAATGAACCCTCAAAAGGGGTTTGGGACTGTTTTTGCATCCCAATCCATTGGTTTAACATGCTTTCAAGGGAAATGCATTGGAGCTTTGTACTTGGGGTGGTGATTGTTTATGGAATAAGCCAGGGACTTGGTGGAGCTCTTGCTGAAGTTGGCACTAAGTATTATATGAAAGATGTTCAGAAGGTGCAGCCATCTGAGGCACAGGTTTATAAAGGAATCACATCCATTCCTTGGATTGTGAAGCCTCTATGGGGTCTTCTCACTGATGTTCTCCCAGTTTTTGGGTATCGAAGGAGACCTTATTTCATTTTTGCTGGTTTCTTAGGAGTGATTGCCATGCTTTTGTTATCTTTGCACGAAAGCCTGCATCTTGTGTTGGCCCTTTTGTCATTGACAGCTGGCAGTGCTGGGGTGGCAATAGCAGATGTGACCATTGATGCCTGTGTGGCACAGAACAGTATTTCTCATCCCTCACTTGCCGCTGACATGCAAAGTTTGTGTGCCTTCAGTTCTTCTGTTGGACAACTAGTTGGATTCTTCATTAGTGGTATCTTTGTTCACCTTATAGGCCCTATGGGGGTGTTTGGTTTGATGACTATCCCAGCTGGACTTGTAGTTTTGGTTGGTTTTCTGCTTGATGAGCCTCGTATGCACGACACCTCTTATAGACAGGTGAAACAAAATTTTGTCGATGCTAGCAAGGCTATGTGGACTACATTGAGGAGTGAAGATGTGTGGGGACCTTGTTTATACATGTATTTATCCCTTGCATTGAGTTTGGATATCCGTGAAGGAATGTTTTATTGGTATACAGACTCAAAAGGTGGACCATCTTTCTCTCAGGAGAGTGTTGGTTTTATATTTTCAATTAGTTCAGTGGGGGCCCTTTTAGGAGCAATACTATACCAGTATGCCCTAAAGGATTATGCATTCAGAGACTTGCTCTTCTGGACTCAGTTGATTTATGGTTTGTCAGGGATGCTTGATCTGGTTCTAGTCTTAAGATGGAGCCTCAAGTTTGGCATACCAGATTATTTCTTTGTTGTGATTGTTGAAAGCATAGCTCAAATGACCAACAGGCTCAAGTGGATGCCAATGCTTGTTCTCAGCTCAAAGCTTTGTCCCTCAGGCATTGAAGGCACCTTCTTTGCTCTACTAATGTCAATTGATAATGTTGGTCTTCTCTCAGCATCATGGGGTGGTGGCTTTGTTCTCCACATACTAAGGATCACAAGAACAAGGTTTGATAATGTTTGGTTGGCTATTTTGATCCGTAACATTTTAAGGATCACCCCACTTTGCATGCTGTTTTTGGTGCCTAGAGGTGACCCCAACTCTTCCATTCTTCCAAGTAAAAGCGTGGATTCAAAGGTGGCTATTGACACTTCAGACGCCAAAAATGTTGAATTGGTGTCCCTTGTACACAGTGTTGATGATGGTAAATAG 1497 0.4295 MQEEENQEDPCGESMEENEPSKGVWDCFCIPIHWFNMLSREMHWSFVLGVVIVYGISQGLGGALAEVGTKYYMKDVQKVQPSEAQVYKGITSIPWIVKPLWGLLTDVLPVFGYRRRPYFIFAGFLGVIAMLLLSLHESLHLVLALLSLTAGSAGVAIADVTIDACVAQNSISHPSLAADMQSLCAFSSSVGQLVGFFISGIFVHLIGPMGVFGLMTIPAGLVVLVGFLLDEPRMHDTSYRQVKQNFVDASKAMWTTLRSEDVWGPCLYMYLSLALSLDIREGMFYWYTDSKGGPSFSQESVGFIFSISSVGALLGAILYQYALKDYAFRDLLFWTQLIYGLSGMLDLVLVLRWSLKFGIPDYFFVVIVESIAQMTNRLKWMPMLVLSSKLCPSGIEGTFFALLMSIDNVGLLSASWGGGFVLHILRITRTRFDNVWLAILIRNILRITPLCMLFLVPRGDPNSSILPSKSVDSKVAIDTSDAKNVELVSLVHSVDDGK 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00468 498 CDD MFS_FBT 49 454 - -
Cca05g00468 498 Gene3D MFS general substrate transporter like domains 36 444 IPR036259 -
Cca05g00468 498 SUPERFAMILY MFS general substrate transporter 48 441 IPR036259 -
Cca05g00468 498 PANTHER FOLATE-BIOPTERIN TRANSPORTER 1, CHLOROPLASTIC 11 496 IPR039309 -
Cca05g00468 498 MobiDBLite consensus disorder prediction 1 21 - -
Cca05g00468 498 Pfam BT1 family 268 461 IPR039309 -
Cca05g00468 498 Pfam BT1 family 58 225 IPR039309 -
Cca05g00468 498 PANTHER FOLATE-BIOPTERIN TRANSPORTER 2-RELATED 11 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00468 Cca-Chr5 10187746 10193134 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00468 - - ccaj:109816000 968.763