Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00455 ATGGCTGGGAAGGTTTTGAAAGAGTCCAAGTCATTGAcggcggcggaagcggcgggggcggcagcggagatggagactgcggcggTGTCATCGGTGAAGTGCTGCTGCTGCGGTTTGGTGGAGGAGTGCACGCAGGCGTACATAGGGCGCGTGAGGGAGAGGTATGGGGGGCGTTGGATTTGTGGTCTTTGCGCTGAGGCAGTGAAGGAAGAGAGGGAGAGAGAGAAGATAGTGATAACCATGGACGAGGCTCTTAAGCGACACATGAGGTTCTGCCAACAGTTCAACTCCTCCACCCCTCCGAACAACACCAACGATGATTTCATCCTCGCCGTCAAGCAGATCCTGTTCCGCACCTTGGACTCTCCCACCAAAGATCGTTTCATTTGTCGCCCACTTGGTAGATCTCACAGCTGCTTCTCCACCATGCAAGGGGCTGAGACTGAGTGA 450 0.4778 MAGKVLKESKSLTAAEAAGAAAEMETAAVSSVKCCCCGLVEECTQAYIGRVRERYGGRWICGLCAEAVKEEREREKIVITMDEALKRHMRFCQQFNSSTPPNNTNDDFILAVKQILFRTLDSPTKDRFICRPLGRSHSCFSTMQGAETE 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00455 149 PANTHER OS01G0745000 PROTEIN 17 144 IPR012876 -
Cca05g00455 149 PANTHER DUF1677 FAMILY PROTEIN 17 144 - -
Cca05g00455 149 Pfam Protein of unknown function (DUF1677) 29 118 IPR012876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00455 Cca-Chr5 9958882 9960399 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00455 - - gmx:100795601 251.521