Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00454 ATGAGCTTATCCAAGAAAGGATTCCAAACAGATGCGAAACTGAGCACCACAAACAAAGCAACATCTTTGAATCCAAATGCAGCAGAGTTTGTTCCTTTTTCCCTAAGATCATTGCCATCTGGAAGCACGAGCTTGGTAGACACAGCAGCAAGTTTTACTTCTGCTGGATCTCTTGGGAAAGCAGTTTTAGATAGATCAGAATCATCCATTTCAAATAATTCCGATGATGAGGCTCACCAGTATTGGCGTTGTCAGCTTCCTGATGACATCACGCCTGACTTCAAGGTCATGGGAGAAGATGAATCCCAAGGTCTTAACAATATCTCTTTAGCAGGCTTATCTTTACATGATGATAATGAATCCTCAATGTTTCCTTCTAAGGGAACTAGATATATATTAAATGAGCAGCAGGATTTGTCTCAACAGAACCTTAATGGCAATAGTTTTGCTGACAAATTAAGGTTTTCCAATTCAACCTACAGGGAAGAACCAACTTCAGCAAGCATTTTGAACTCATCAGCAAAGCCTTGGGATAGGCAAATTGGGAATACCAACATGCATGTAAACAGTGGTCAAGAGGCACTTGTTTATGATGACAACTCTGGACATGGATTCTTAAATGATGTTTTTGCTGGAAATTCTATTGTGAATGATACTGATTTAAACCCTTTGGAGTTTTTAGCTTCTCTATTCCCTGGTTTTGCTTCAGAAAGCCTTGCTGAAGTTTTCTTTGCCAATGGATGTGATTTGCATCTTACTGTTGAGATGCTCACTCAGTTAGAGATTCAAGTTGATGGTAGTTTCAATCAGAATCTGAGTCCGAAGACTCTGTCAGCTCCCAATCTGAGTGCGATGGATTTTCCAGCTCTTTCTCCATCAAATGGCCAGAATACTGCAAAATATGCTGCAGATAATGTTCAACAAAGTGGCAATCCTTACTTATCATCTGATAAGGACATGCTCATGTTCAAATCTGGCTCTTCTATTCCATCTAGAGGTTCTGTTGACTTTGCCTCGGCTGTTAGGAAATTGGCTTCTCAGGATTCTGGTATATGGAAATATGATAAAAATGGTTCTGGTGATGCTTCTACTGGCTCAAGTAGGAGTTTAAATGCTTTGGCTAGTGCCTACAATGGTGGACAGGGGAGAGTCAACTTTGGTGATAGATCACAGAACCGTGGTTCTGCTCGGGCAGCTCCTGTTTGGCTTGAAACTGGTGAAGCAGTTGCAAATATGTATTCTGAGCTGCGGGAGGAGGCTCGTGATCATGCACGTTTGCGTAATGCATATTTTGAGCAGGTGGGTCTTTGA 1311 0.4134 MSLSKKGFQTDAKLSTTNKATSLNPNAAEFVPFSLRSLPSGSTSLVDTAASFTSAGSLGKAVLDRSESSISNNSDDEAHQYWRCQLPDDITPDFKVMGEDESQGLNNISLAGLSLHDDNESSMFPSKGTRYILNEQQDLSQQNLNGNSFADKLRFSNSTYREEPTSASILNSSAKPWDRQIGNTNMHVNSGQEALVYDDNSGHGFLNDVFAGNSIVNDTDLNPLEFLASLFPGFASESLAEVFFANGCDLHLTVEMLTQLEIQVDGSFNQNLSPKTLSAPNLSAMDFPALSPSNGQNTAKYAADNVQQSGNPYLSSDKDMLMFKSGSSIPSRGSVDFASAVRKLASQDSGIWKYDKNGSGDASTGSSRSLNALASAYNGGQGRVNFGDRSQNRGSARAAPVWLETGEAVANMYSELREEARDHARLRNAYFEQVGL 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00454 436 CDD CUE_CID7_like 221 263 IPR041806 -
Cca05g00454 436 PANTHER POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 7 1 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00454 Cca-Chr5 9907133 9909691 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00454 - - gmx:100799961 773.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00454 05 9907133 9909691 Cca05g00454 05 9907133 9909691 ECH