Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00452 ATGGAAATGGCTtcctcctcctcctcctccttcatcctAAGCTCAGATTTCAAGTGCATAGTTTCTTCGAGGAACACTAGAACCCTCTCTGGGTTTGGTGCATTGCACCCAAATGGTTTATTCAGGAAATGCTTCCACTTTCACACTCTATCTGCTAGAATGGTGGCAAGGACTACAAAGATGGTTTCTGATGTTTATGCTGGCGGAGACACAACTTTCAGAGTCAATAGCAAGATGTACACCAAGTTGGACTCTTGTTTGGTCATACCACCTACCCCAAATCGTGCCAAGCCTCGAGCAATAATCAAGTTCCTGGGTGGTGCCTTCATTGGTGCTGTTCCTGAAGTTACTTACGGCTACCTGATAGAATTTTTGGCAAGGGAAGGTTTTCTTGTGGTGGTGGTGCCTTATAATGTGACATTTGACCATTCTCAAGCTGCTAAACAAGTATATGAGAGGTTCCATGCTTGTTTGGGTACAATCCTTACATCTGGGTTGCCTCAAGCAAATTTGTCACCTGCTCAGCTAGAAGACCTTCCCCTTTTCTCTGTTGGTCACAGTAATGGGGCACTTCTTCAACTACTCACAGGAAGCTTGTTTTCTGAGAAAATACCTAAGGCTAATGCCATAATCTCATACAACAACAGGCCAGCAACGGAAGCAGTCCCTTACTTTGAACAGTTGGGTCCTGTAGTCAGCCAAATGATGCCAGCTGTGGAGGCAACTCCTTTTTATTCAATAGCTAGAAATGCATCAGGAGACGTGTGGAAGATGATGTTGGATGCTGCTAGATCAACTCTACAGGAAACTGAGCAGGAAATACTGAATTCCTTAACTAAATTTGTTGATCAGTTGCCATCAGTAATGAACGAGGTTACACAAGGAGTATCAGAGTTCAAGCCAACACCAACTGAAAACCGTGATTGCTTTAAATGTTCATACAATGTTGAACACACACTATTGGTGAAGTTCAATTTTGACACAATTGATGAGACAGATATTCTTGAACAAACACTGAAGCCTCGTGTGGAGTCACTGGGTGGTACATTAGAAAAAGTAACATTAAGTGGTAACCACATCACACCATGCATTCAGGAACCAAGATGGCAAGTGGGTAAATTGTACACTCCCGCAGATGCTGTTGCCCAAGGGCTTAAATCTCTTTCTTTGAATGAGACCAAGATCCTTGCCAGAACCATTAGCGACTGGTTCAGACGTTTTGAGAGTTGA 1230 0.422 MEMASSSSSSFILSSDFKCIVSSRNTRTLSGFGALHPNGLFRKCFHFHTLSARMVARTTKMVSDVYAGGDTTFRVNSKMYTKLDSCLVIPPTPNRAKPRAIIKFLGGAFIGAVPEVTYGYLIEFLAREGFLVVVVPYNVTFDHSQAAKQVYERFHACLGTILTSGLPQANLSPAQLEDLPLFSVGHSNGALLQLLTGSLFSEKIPKANAIISYNNRPATEAVPYFEQLGPVVSQMMPAVEATPFYSIARNASGDVWKMMLDAARSTLQETEQEILNSLTKFVDQLPSVMNEVTQGVSEFKPTPTENRDCFKCSYNVEHTLLVKFNFDTIDETDILEQTLKPRVESLGGTLEKVTLSGNHITPCIQEPRWQVGKLYTPADAVAQGLKSLSLNETKILARTISDWFRRFES 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00452 409 SUPERFAMILY alpha/beta-Hydrolases 86 204 IPR029058 -
Cca05g00452 409 Coils Coil 260 280 - -
Cca05g00452 409 PANTHER OS04G0405600 PROTEIN 48 407 IPR010765 -
Cca05g00452 409 PANTHER INITIATION FACTOR 4F SUBUNIT (DUF1350) 48 407 - -
Cca05g00452 409 Pfam Protein of unknown function (DUF1350) 285 404 IPR010765 -
Cca05g00452 409 Pfam Protein of unknown function (DUF1350) 96 243 IPR010765 -
Cca05g00452 409 Gene3D alpha/beta hydrolase 78 296 IPR029058 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00452 - - gmx:100799131 743.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00452 05 9789930 9796044 Cca05g00452 05 9789930 9796044 ECH