Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00432 ATGGCGAACTCGAACACGATCACGATCCACCACAAAGAAGTGGATGAAAGGGAGGCCATACCCCTGCTCACCCCATACAATATGAGAAATTTTAATCTATCTCACAGGATAGTGTTGGCACCGTTAACACGATCGAGGTCTTACAACTACGTCCCTCAACCGCATGCAGCTCTATATTATTCTCAAAGAACAACTAAAGGTGGCTTCTTGATCGGGGAAGCCTCTGGGGTGTCTGATACGGCAGTTCATGGGTACCCTAATACACCTGGCATTTGGAAAACTGAGCATGTGGAAGCTTGGAAACCAATTGTGAACGCTGTTCATGAAAAGGGGGGTGTTTTCTTTTGTCAACTTTGGCACGCGGCAATAGTCTTCAACGATGAATACGAACCAGATCATGGCCAAGCTGCAATATCCGGCACAAACAATCCAGTTGATAAGGATATCACCAACAATAAAGCAACAACGACTCTTTCTGGGAGTGTGACAACGGATGAAATTTCAAAATTTGTCAATGACTTCAAAATGGCGGCCAAAAATGCCATAGAAGCAGGTTTTGATGGGGTGGAGATACACGGAGCGAACGGGTACTTACTGGATCAATTCCTAAAGGGAAAAGTGAACGACAAGTATGGAGGTAACATAGAAAATCGTTGTCGGTTCCCACTGCAAGTGGTGAAGGCAGTTGCTGATGAGATTGGAGCAGACAAGGTTGGGATTAGGCTCTGCCCTTTCCCTGATGAGTCTGATCAGTGTGACCCTCAAGCACTGGCTATTCATATGGCTCAATCACTGAATGAACTGGGAATTCTATACTGCCACATGATTGAACCCAGGATGGTAACACAAGTCAACACCAAATGGTCTCTATTGCCAATTAGAAAGGTCTTCAAGGGGACATTTATTGTGGCTGGTGGTTACAACAGGAGTGAGGGAAACGAAGCTATATCAAGTGGTGCTGCCGATTTGGTCGCATATGGACGCCTTTTCTTGGCGAATCCAGATCTGCCCACAAGATTTCAGCTCGATGCTCAGTTAAACGACCCCGATCCTACTACCTTTTGTATACCTGATCCTGTGCTTGGATATACCGATTACCCATTTCTTCAACATATATAG 1119 0.4531 MANSNTITIHHKEVDEREAIPLLTPYNMRNFNLSHRIVLAPLTRSRSYNYVPQPHAALYYSQRTTKGGFLIGEASGVSDTAVHGYPNTPGIWKTEHVEAWKPIVNAVHEKGGVFFCQLWHAAIVFNDEYEPDHGQAAISGTNNPVDKDITNNKATTTLSGSVTTDEISKFVNDFKMAAKNAIEAGFDGVEIHGANGYLLDQFLKGKVNDKYGGNIENRCRFPLQVVKAVADEIGADKVGIRLCPFPDESDQCDPQALAIHMAQSLNELGILYCHMIEPRMVTQVNTKWSLLPIRKVFKGTFIVAGGYNRSEGNEAISSGAADLVAYGRLFLANPDLPTRFQLDAQLNDPDPTTFCIPDPVLGYTDYPFLQHI 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00432 372 PANTHER NADH OXIDOREDUCTASE-RELATED 18 370 IPR045247 GO:0010181|GO:0016491
Cca05g00432 372 SUPERFAMILY FMN-linked oxidoreductases 21 370 - -
Cca05g00432 372 Pfam NADH:flavin oxidoreductase / NADH oxidase family 22 343 IPR001155 GO:0010181|GO:0016491
Cca05g00432 372 CDD OYE_like_FMN 21 351 - -
Cca05g00432 372 Gene3D Aldolase class I 15 371 IPR013785 -
Cca05g00432 372 PANTHER 12-OXOPHYTODIENOATE REDUCTASE-LIKE PROTEIN 18 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00432 Cca-Chr5 9497127 9499480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00432 15 370 Acyl Lipid Metabolism Gene Families AT1G76690 60.763 4.20e-161 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00432 K05894 - gmx:100810271 548.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00432 05 9497127 9499480 Cca05g00432 05 9497127 9499480 ECH