Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00427 ATGGGTTGCAACAACTCAACACTGGATCGGCTTCCAGCGGTGGCTCTGTGCCGCGACCGTTGCAGCTTCGTGGACCAAGCTCTCCGCCATAGCTACGCCCTCGCAGATGCACACGTGGCACACATGCATTCCCTCAACACTCTCGGCCTCACCCTCTCTCGCTTCTTCCATCACTTTCAATCCCAACACGATGAAGAAAATCAATCCCACTTTCTCAACCCCACTCGTTACGACTCCTCGCCTTCGCCTCCGCGTTTTCGTTACGAGTTTGGGAGTTATGCGCCCTCACCACCGCCTCCTGCAACCTCAACATGGGATTTCTTGAACGTCTTTGAAAACTTCGACAAGTACCACGTTCCTTGTAGTCCCAGACATGATGAGCATGAAAACGAGAAGAAAAATAATATTAACCAGGAAGAAGCAAAGGAACGTTGCACCAACTCGGCCTCGTCCAGAGATTTATCAGATGCAATGGAAGAGATTCAGAAAATGTTTGAGAGAGCATCTAAGTCGGGTAACCCCATTTTGGAAATGCTCCGCGTTGGCAAACTCCGTTACCATCCTAATATAGCCGTTAATCCAGTTTCTTGTAAGATGATGCACGCCTTCACTCCCTCGAAGCACCTTAACTGCATGGATTCCTCGAGAAAGTATCAAGGAGTTGACATAGACAAGGGCCTCAGTTATGATGGGAATCTTTGCTCTACTCTTAACAAGCTTTGTATGTGGGAGAAGAAGCTTTATGTTGAAGTCAAGGATGGGGAGAAATTGCGCGTACTTCACGAGAAGAAGTGCAGACAATTGAGACGGATGAATAAAAAGGGTGCCGATGCACACAAAATTGATTCTGTTGAAGCTTTGATTGAGATTCTAGCTACCAAAATCAAAATTTCTTTCCAGGTGGTTGACAAGATATCCAGCACTATATGTAAGTTGATGGAAGAGGAGTTATGGCCTCAGATCAACAAGTTCATTTTCAGGTTTCTTGAAATGTGGAAAGAAATGCTAGAATGTTACAGAAGCCAATATAAGGAAATTGCTGAAGCCAAAAGTGTAGATGCCTCTTCATTTAGCAGGAAGCCTAGTAATTCTCATCTTGATGAATTAATTAAACTCAAATCTGAGGTACAGAACTGGAACTTAAGCTTCTCAGATTGGATTTACACCCAAAAGGCCCATGTGAAAGCCTTGAATGGCTGGCTAGTAAGATGTCTACCATATGAGCCTGAAGAATTACTTGATGGTACACCTCCCTTCTCTCCTGCAAGGATTGGTGCACCTCCTGTGTTTGTGATCTGTAACAAATGGTCACGAGCCATGGATATTCTCTCAGAGAAGGATGTCATTGAAGCTATTAATGGATTTATGCTCAAAGTGAATGAGCTCTTGGAAAAGCATATTTCAGACCTTCAGCAAAACTTAACATTGGACAAGGAATTGGAGAGGAAAGTGAAAATGTTGGAGAGGGAGGAGCAAAAGATGCACAAAGTGGTTCAGGCTAGAGAAAGAATGACTCCAATTGGTAGAGAAAATAATAATGCAGTGCATCATGGTGATCTTGTTGATATAATGAGTTTGCAATCTGGTCTAAAACATGTCTTTGCTACCATGGAGAGGTTCATTGCTACCATCGCTTGTGTATATGAAGATTTGTGCCAGCAAATTGAGGAAGACAACCATGTTTTGTGA 1689 0.4358 MGCNNSTLDRLPAVALCRDRCSFVDQALRHSYALADAHVAHMHSLNTLGLTLSRFFHHFQSQHDEENQSHFLNPTRYDSSPSPPRFRYEFGSYAPSPPPPATSTWDFLNVFENFDKYHVPCSPRHDEHENEKKNNINQEEAKERCTNSASSRDLSDAMEEIQKMFERASKSGNPILEMLRVGKLRYHPNIAVNPVSCKMMHAFTPSKHLNCMDSSRKYQGVDIDKGLSYDGNLCSTLNKLCMWEKKLYVEVKDGEKLRVLHEKKCRQLRRMNKKGADAHKIDSVEALIEILATKIKISFQVVDKISSTICKLMEEELWPQINKFIFRFLEMWKEMLECYRSQYKEIAEAKSVDASSFSRKPSNSHLDELIKLKSEVQNWNLSFSDWIYTQKAHVKALNGWLVRCLPYEPEELLDGTPPFSPARIGAPPVFVICNKWSRAMDILSEKDVIEAINGFMLKVNELLEKHISDLQQNLTLDKELERKVKMLEREEQKMHKVVQARERMTPIGRENNNAVHHGDLVDIMSLQSGLKHVFATMERFIATIACVYEDLCQQIEEDNHVL 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00427 562 MobiDBLite consensus disorder prediction 122 149 - -
Cca05g00427 562 MobiDBLite consensus disorder prediction 122 153 - -
Cca05g00427 562 Pfam Protein of unknown function (DUF632) 154 460 IPR006867 -
Cca05g00427 562 PANTHER UNCHARACTERIZED 93 135 - -
Cca05g00427 562 PANTHER UNCHARACTERIZED 131 557 - -
Cca05g00427 562 PANTHER UNCHARACTERIZED 1 85 - -
Cca05g00427 562 PANTHER F5M15.15 1 85 - -
Cca05g00427 562 PANTHER F5M15.15 131 557 - -
Cca05g00427 562 PANTHER F5M15.15 93 135 - -
Cca05g00427 562 Coils Coil 470 493 - -
Cca05g00427 562 Pfam Protein of unknown function (DUF630) 1 57 IPR006868 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00427 Cca-Chr5 9376794 9379193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00427 1 55 Acyl Lipid Metabolism Gene Families AT2G27090 43.636 9.27e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00427 - - gmx:100787793 650.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00427 05 9376794 9379193 Cca05g00427 05 9376794 9379193 ECH