Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00425 ATGGCTGAGGAGAAGCAGCACAAGGACAACGAGTACGACAACACTGCTGAGGTGGAGGTCAAAGACCGTGGGGTTTTAGATTTTCTCGGGAAGAAAAAGGAAGAAGAGGCCATCGTCACTGAGTTCGACAACAAGGTCAAGGTTTCTGATGAACCTGAGACCAAGCTGCAGGTGGAGCAAGAACCAGAAGAGAAGAAACACACCCTTCTTGAGAAGCTCCACCGATCCAACAGCAGCTCCAGCTCCTCgagtgatgaagaggaggaaggagaaggtggagagaagaagaagaagaagaagaaaaaggataagataggaggtggtggTCGCAAGGAGCAAGACACCACTGTTCCGATTGAGAGAGTGGAGGTTGAAGCAGACAGTGAGGATAAGAAGGGTTTCCTCGACAAGATTAAGGAGAAGCTGCCAGGTCAGCACAAGAAGGAGGAGGAGGAAGTGCCTGTGCCTCCGACATCATCAGAGTGTGATGCTCCCCACACTGAGGCTCATGAAGGGGAGAAGAAGGGCCTTTTAGATAAGATCAAAGAGAAGCTTCCTGGTTATCACCCCAAGACAAATGAGGACAAAGAAAAGGAGATCGGAACTCATTGA 612 0.4363 MAEEKQHKDNEYDNTAEVEVKDRGVLDFLGKKKEEEAIVTEFDNKVKVSDEPETKLQVEQEPEEKKHTLLEKLHRSNSSSSSSSDEEEEGEGGEKKKKKKKKDKIGGGGRKEQDTTVPIERVEVEADSEDKKGFLDKIKEKLPGQHKKEEEEVPVPPTSSECDAPHTEAHEGEKKGLLDKIKEKLPGYHPKTNEDKEKEIGTH 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00425 203 PANTHER DEHYDRIN ERD14 1 196 - -
Cca05g00425 203 MobiDBLite consensus disorder prediction 106 155 - -
Cca05g00425 203 Pfam Dehydrin 54 146 IPR000167 GO:0009415
Cca05g00425 203 Pfam Dehydrin 131 189 IPR000167 GO:0009415
Cca05g00425 203 MobiDBLite consensus disorder prediction 45 203 - -
Cca05g00425 203 PANTHER DEHYDRIN XERO 2-RELATED 1 196 IPR000167 GO:0009415
Cca05g00425 203 MobiDBLite consensus disorder prediction 1 33 - -
Cca05g00425 203 ProSitePatterns Dehydrins signature 2. 180 187 IPR030513 -
Cca05g00425 203 MobiDBLite consensus disorder prediction 45 73 - -
Cca05g00425 203 MobiDBLite consensus disorder prediction 164 203 - -
Cca05g00425 203 ProSitePatterns Dehydrins signature 1. 80 100 IPR030513 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00425 - - aprc:113845851 190.274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00425 05 9310562 9311261 Cca05g00425 05 9310562 9311261 ECH