Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cca05g00381 | ATGTTTGTTAAGGTCGATAATGCCTCTGTTTTGTTCTTTTTGGGGTTGATAGCCCCCTTTGTCAAACTTGATCCAATAATTCAACCTTTGGTTGAGCAAGATTCTAAAACTCTCCAACAGTTGCTTACAGAGATACCCTCTTGGATTAAAAATCCAGACTTTGACCGTCTTGATTGGCTTAATAAATTTATTGAGCATATGTGGCCTTATCTGGACAAGGCAATTTGCAAGACTGCAAGGAGTATAGCAAAGCCCATTATTGCTGAGCAAATTCCGAAGTACAAAATTGATTCAGTTGAATTTGAAGAACTTAACTTGGGTTCTCTGCCACCAACTTTTCAAGGTTGA | 348 | 0.3822 | MFVKVDNASVLFFLGLIAPFVKLDPIIQPLVEQDSKTLQQLLTEIPSWIKNPDFDRLDWLNKFIEHMWPYLDKAICKTARSIAKPIIAEQIPKYKIDSVEFEELNLGSLPPTFQG | 115 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cca05g00381 | 115 | PANTHER | CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN-RELATED | 15 | 115 | - | - | |
| Cca05g00381 | 115 | ProSiteProfiles | Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. | 53 | 115 | IPR031468 | GO:0008289 | |
| Cca05g00381 | 115 | PANTHER | EXTENDED SYNAPTOTAGMIN-RELATED | 15 | 115 | IPR045050 | GO:0008289 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Cca05g00381 | Cca-Chr5 | 8311448 | 8312970 | Tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cca05g00381 | - | - | ccaj:109793643 | 193.741 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Cca05g00381 | 05 | 8311448 | 8312970 | Cca05g00381 | 05 | 8311448 | 8312970 | ECH |