Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00281 ATGCAGAATCTTAACCGATTCGTTTCACTTTCTCTCCCGCCTCTTTCCTCTTCTCGCGCTCCCTTCGCTTCTCGAACCTTCTCCTTCGCCGCACCGTTTCGCTCTGCGTCCGCAGGAGCCACTCAGTTGCTTGCTCAATTCTCAATGGATGGGATCCATGGAATTGGTGCACATGACCATAGCTCAGTCAATTTTCCTGGCAATGATAGTAGCAAATCTTCTGATTTTGAACCTAAAACTGCTATAGGCAAGCAGATATTCTGTAACCGGCCACTGAACATGAAAAACATTGTTGCTGTGGGATTTGACATGGATTATACTTTGGCACAATACATTCCTGAAACTTTTGAATCTCTTGCTTATCAACACACGGTTGAAATGCTGGTTTATGATTTGCATTACCCTAGTGAGTTATTGAGTTGGTCATTTGACTCGAATTACATGGTTAGGGGCTTGGTTCTTGATAAAAAGAGAGGCAACATATTGAAGATGGATCGGCACAAGTATGTGAAAGTAGCCTATCATGGATTTAAAGAGTTGTCAAAAGAAGATAAAGTTGGAACATATGCAAATACTTTAGTACATGATTCTTTTGATGGGCCAGACTATGCTCTCATTGATACACTCTTTTCACTGGCGGAAGCCTACTTATTTGCTCAGCTGGTTGATTTTAAGGACAGCAATCCTGGAAAGTTTCCAGAGCATGTTGATTATGCTTGTCTGTACAAAGATGTTAGAGCTGCAGTAGATATGTGCCACCGAGATGGAACATTGAAGAAACAGGTTGCCATAGATCCCAAAAGGTATATAAATGAAGACACCTCAATAATTCCCATGCTTAAAATGCTCAGAGAATCTGGACGAGCAACATTTTTGGTGACAAACAGTTTATGGGACTATACAAACGTGGTTATGAATTTCCTCTGTGGATCCAGTGAGGCAAATGAAAATGCTCAGTTTGATTGGCTTAAATACTTTGATGTCGTCATCACTGGCAGTTCAAAGCCAAGCTTTTTTCTTGAGGGAAATCCTGCCAACCTGTTTGAGGTTGACCCTGAGAGTGGAATGCTACATAATACAGATAATGGCTCTCCAATGGCTCAGGTGGGTAATATCTCAGAAAGGGTACTAAAGGAAGAGAATATTTGTGGTCGAAAAATTTTCCAGGGAGGTAGCGTTGGTCACCTACATAGTCTACTCGCAATAGAATCAAGTTCACAGGTTCTATATGTTGGGGATCACATTTATGGAGATATTCTACGCAGCAAAAAAGTTCTTGGTTGGAGAACAATGTTGGTAGTCCCAGAGCTCGAGAAGGAGGTTAAACTACTTTGGGAATTGAGAGATGACCGCAAGGAGCTTCAATTTCTGAGGAGTATGCGTGACCTCGTTGAGGATGAAATGCATTATCTGAATGAGTCTCTCAGATTAAAGAATCCAGATGAGGATACCAAGAAGATGTTAAATTTGAAACTTGATAAATTGAAGCTTGAAAGAGAGAGGGTTCGATTAAGTCATCAAGAAGCTCAAAAAGAATTACACCAGAAGTTTCACGAGCCATGGGGCCAGCTGATGAAGGCTGGTTATCAGAACTCTCGCTTTGCATATCAGGTTGAGCGATTTGCGTGCCTTTATACTAGCCAAGTATCTAACTTGGCATTGTTCTCATCAGACAAGTACTACAGACCCAGTGAAGATTTTATGCAGCACGAATTTGGCATTTTAGAAAGCTGA 1734 0.4135 MQNLNRFVSLSLPPLSSSRAPFASRTFSFAAPFRSASAGATQLLAQFSMDGIHGIGAHDHSSVNFPGNDSSKSSDFEPKTAIGKQIFCNRPLNMKNIVAVGFDMDYTLAQYIPETFESLAYQHTVEMLVYDLHYPSELLSWSFDSNYMVRGLVLDKKRGNILKMDRHKYVKVAYHGFKELSKEDKVGTYANTLVHDSFDGPDYALIDTLFSLAEAYLFAQLVDFKDSNPGKFPEHVDYACLYKDVRAAVDMCHRDGTLKKQVAIDPKRYINEDTSIIPMLKMLRESGRATFLVTNSLWDYTNVVMNFLCGSSEANENAQFDWLKYFDVVITGSSKPSFFLEGNPANLFEVDPESGMLHNTDNGSPMAQVGNISERVLKEENICGRKIFQGGSVGHLHSLLAIESSSQVLYVGDHIYGDILRSKKVLGWRTMLVVPELEKEVKLLWELRDDRKELQFLRSMRDLVEDEMHYLNESLRLKNPDEDTKKMLNLKLDKLKLERERVRLSHQEAQKELHQKFHEPWGQLMKAGYQNSRFAYQVERFACLYTSQVSNLALFSSDKYYRPSEDFMQHEFGILES 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00281 577 Gene3D - 82 130 IPR023214 -
Cca05g00281 577 Gene3D - 247 463 IPR023214 -
Cca05g00281 577 Coils Coil 485 512 - -
Cca05g00281 577 TIGRFAM HAD-IG-Ncltidse: HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase 86 453 IPR008380 -
Cca05g00281 577 CDD HAD_cN-II 87 547 - -
Cca05g00281 577 PANTHER CYTOSOLIC PURINE 5-NUCLEOTIDASE 22 577 - -
Cca05g00281 577 SUPERFAMILY HAD-like 84 573 IPR036412 -
Cca05g00281 577 Pfam 5' nucleotidase family 86 572 IPR008380 -
Cca05g00281 577 PIRSF NT5C2 67 577 IPR016695 -
Cca05g00281 577 PANTHER 5'-NUCLEOTIDASE DOMAIN-CONTAINING 22 577 IPR008380 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00281 Cca-Chr5 6006145 6013911 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00281 - - gmx:100814787 938.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00281 05 6006145 6013911 Cca05g00281 05 6006145 6013911 ECH