Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00266 ATGATTGAAGATAAGATGAAAGGCGAAGAAAGAGTCCAAAACGCAAAGAGAAAATGGGTCTTAGCTGCTATTATTCTGCTCGCTCTCTGCTCCATCTTCACTGCTTCTCTCACTCTCAAATGCTCACCCGCTAACCTCACCCCTCACTCCGATTCCACCACTCTCCACGACTTCGATGTGCTGGAAGTGGAAGAGAGGGAGAAAGTGGTGAGACGCATGTGGGATGTGTACACTCAAACCAAGACTGCCTTACCTCGTTTCTGGTCTCATGCTTTTCATGCGGCTTACCACCACTTGCTCACTCATGATCCCACCGTCCGAGATGCTGCTGTTACCGAAATTGCCAAGATGTCCCTACGCTCTCTCAATTTGCACCTTGCTCCACCAATCTCAAATCACAATCCTCAGTTATGGAGAACACATCAAGGGATCAACAAAAATGAAGCAACCAGAGAGTAG 459 0.4771 MIEDKMKGEERVQNAKRKWVLAAIILLALCSIFTASLTLKCSPANLTPHSDSTTLHDFDVLEVEEREKVVRRMWDVYTQTKTALPRFWSHAFHAAYHHLLTHDPTVRDAAVTEIAKMSLRSLNLHLAPPISNHNPQLWRTHQGINKNEATRE 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00266 152 PANTHER OS03G0411600 PROTEIN 14 139 IPR010608 -
Cca05g00266 152 Pfam Protein of unknown function (DUF1195) 17 125 IPR010608 -
Cca05g00266 152 PANTHER PROTEIN, PUTATIVE-RELATED 14 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00266 Cca-Chr5 5624668 5625695 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00266 - - ccaj:109794701 258.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00266 05 5624668 5625695 Cca05g00266 05 5624668 5625695 ECH