Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00263 ATGAAGGCTACTCTCAAGGGCAAGTACGACCTCGACAAAAACGGCGGTGCACTTGCCACCGCCGCCGTCAACGCCGGCGACGTCAAGTTCAGAGCCTCCTTCAGAGCCTCCGTAACGGAAGCCACCTTCATTAACGGCCCCAGCCTCACCGGTTTGTCTCTCGCCGTCGAGAAGCCCGGTTCCTTCATCGTCGACTACAACGTCCCCAAAAAGGACTTTCGTTTTCAGTTCATGAACACGGTTAGGGTTAGGGAGAGGCCGTTGAATTTGACTTACGCCCACAACTTCAGTGACAACCGCACCGTTTTGGATGGAACCTTTGTGTACGATCCTGCGAACAAGTTTTCGGCCAATTATGCTCTTGACTCGGGAAACTGCAAGTTGAAGTACACTTATGTTCACAAGGGGTTGACCACGTTTGAACCCACCTATGACGTGGCTAAGAACACGTGGGACTTTGCGGTTTCCCAGAGGGTCTATGGTGATGACACGTTGAGGGCCACTTACCAGACATCCACCAGGGTTTTGGGCCTTGAGTGGTCGCGGATGTCCAAACACCCTGCTGGCTTCAAGATCGTAGCATCTGTTAACTTGGCTGAAGAATTGAAAGCTCCCAAAGTTGTTGCTGAGACCTCATGGAATTTTGAGATGTAG 654 0.5183 MKATLKGKYDLDKNGGALATAAVNAGDVKFRASFRASVTEATFINGPSLTGLSLAVEKPGSFIVDYNVPKKDFRFQFMNTVRVRERPLNLTYAHNFSDNRTVLDGTFVYDPANKFSANYALDSGNCKLKYTYVHKGLTTFEPTYDVAKNTWDFAVSQRVYGDDTLRATYQTSTRVLGLEWSRMSKHPAGFKIVASVNLAEELKAPKVVAETSWNFEM 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00263 217 PANTHER OUTER ENVELOPE PORE PROTEIN 24A, CHLOROPLASTIC-RELATED 1 217 IPR034626 GO:0022843|GO:0034765
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00263 Cca-Chr5 5577696 5579656 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00263 - - gmx:100802815 377.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00263 05 5577696 5579656 Cca05g00263 05 5577696 5579656 ECH