Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00210 ATGGAAGTGGTGGTACAAAGCCCTAGTAGTCCTACTATGGATAATTTTGATTTTGGTGGCAACGTGGGATCGATATACCAAAGTGCTCCTTCTTCACCTAAACGATTTGGTGATTATTACCTAAGTGCGCCCGCGAGTCCATCTAGGTTATCTGAGTTATACAATCAATTTGAATATTTCTCTTCAACCGATCCCTCTTCATCATTTGAGGCAGCCAACAAAGTTGATGATGGCGACGAAAATAGCGACTACAGTTTTGCCTTCTACGTCAATGACGACAAGTCCTCCCGTCCGGCAGAGGAACTCTTTGCCGGCGGCAAGATTAAGCTCTTGGACGAGTCTCGGTCCAAGGAGCCTAAACGAGGAagagagagagaaagagagaaagTTATGACGACGACAACCTTGTCGTCGTCAAACTCGGGTAGAAGGGCAGCACGATCACACTCGCCTTATAGAAAATCAACTTCCCACTACTTGTGGGAAGCAGaacaacaacaacagcaacaacaacagtcaagaagaagCATTAAAGAGGAACCGAATTCTTGTTCGAAGGGGTCGAAAAGGTGGTGGTTGAAGGACTTTTTGTTGTTCCGTAGTGCCTCCGAAGGGAGAGGGTCGTGCAAGGATCCGTTGAAGAAGTACTATAGTAAGAAGAATAATGGTGAAGAAGTGAAAGGGTCATCAAGTTTTAGATCCTCGGATTCGAGAAAGAAGGGACCTGTTTCGGCGCATGAATTGCACTACGCCATGAAGAAAGCGGAGTCCGAGGATATGAAGAAGAAAACCTTCTTGCCATATAGACAAGGAATCTTGGGCAGGTTGGCTGGATTCGGTCTCTAA 846 0.4303 MEVVVQSPSSPTMDNFDFGGNVGSIYQSAPSSPKRFGDYYLSAPASPSRLSELYNQFEYFSSTDPSSSFEAANKVDDGDENSDYSFAFYVNDDKSSRPAEELFAGGKIKLLDESRSKEPKRGREREREKVMTTTTLSSSNSGRRAARSHSPYRKSTSHYLWEAEQQQQQQQQSRRSIKEEPNSCSKGSKRWWLKDFLLFRSASEGRGSCKDPLKKYYSKKNNGEEVKGSSSFRSSDSRKKGPVSAHELHYAMKKAESEDMKKKTFLPYRQGILGRLAGFGL 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00210 281 PANTHER - 1 277 - -
Cca05g00210 281 MobiDBLite consensus disorder prediction 207 222 - -
Cca05g00210 281 MobiDBLite consensus disorder prediction 101 131 - -
Cca05g00210 281 MobiDBLite consensus disorder prediction 206 246 - -
Cca05g00210 281 MobiDBLite consensus disorder prediction 231 246 - -
Cca05g00210 281 Coils Coil 160 180 - -
Cca05g00210 281 MobiDBLite consensus disorder prediction 132 178 - -
Cca05g00210 281 MobiDBLite consensus disorder prediction 101 187 - -
Cca05g00210 281 PANTHER AR781 1 277 - -
Cca05g00210 281 MobiDBLite consensus disorder prediction 62 82 - -
Cca05g00210 281 Pfam Protein of unknown function (DUF1645) 99 267 IPR012442 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00210 Cca-Chr5 4519648 4520999 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00210 - - ccaj:109812321 530.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00210 05 4519648 4520999 Cca05g00210 05 4519648 4520999 ECH