Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00193 ATGGAGAGAATGATGCGACTCAGATCACTCATCCGATCACTGAGTTCCAGATCTTATCATTCCTTCGCATCCACCAGCCATTTCGCGCTTCGACCCTCTCTTCTCTCTCGCCCTCACAATCCCCTTCCTTCTTCCTCAGAATGCAGGCCTCCTTTCTCAATGGGTTTAGGGAGAATGCGTTTCTACAGTGAAGATGTCACTCACATGCCTAATATTAAAGACACTGAGCTTTACAATGCTTTCAAGGATTTGATGGCTGAAAGTTGGAGCGAGCTTCCAGACTCTGTTGTTCATGGTGTTAAGAATGCGCTGTCTAAAAACACTGACGACAAAGCTGGCAAGGAGGTTGTGGAAAATGTGTTCCGTGCAGCTGAAGCTGTTGAGGAGTTTGGTGGGATTCTAGTCTCCTTGAAATTGGAAATTGATGACAGCATTGGAATGAGTGGCGAGGATGTAAAGCCATTGCCTGATCATATAAAAAATGCTCTGCGTACCATTTTTGATCGCTACTCCACCTATTTGAATTCCTTTGGACCTGATGAGAGCTATCTGCGTAAGAAGGTGGAAATAGAATTGGGCGCAAAGATGATTCATTTAAAAATGAGATGCAGTGGCCTTGGGGCTGAGTGGGGAAAGGTTACGGTTCTTGGAACTTCAGGACTTGCGGGTTCATATGTGGAGCAAAGAGCATAG 693 0.4545 MERMMRLRSLIRSLSSRSYHSFASTSHFALRPSLLSRPHNPLPSSSECRPPFSMGLGRMRFYSEDVTHMPNIKDTELYNAFKDLMAESWSELPDSVVHGVKNALSKNTDDKAGKEVVENVFRAAEAVEEFGGILVSLKLEIDDSIGMSGEDVKPLPDHIKNALRTIFDRYSTYLNSFGPDESYLRKKVEIELGAKMIHLKMRCSGLGAEWGKVTVLGTSGLAGSYVEQRA 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00193 230 PANTHER SUCCINATE DEHYDROGENASE SUBUNIT 5, MITOCHONDRIAL 3 230 - -
Cca05g00193 230 Pfam Succinate dehydrogenase subunit 5, mitochondrial 1 230 IPR025397 GO:0006099|GO:0045273
Cca05g00193 230 PANTHER SUCCINATE DEHYDROGENASE SUBUNIT 5, MITOCHONDRIAL 3 230 IPR025397 GO:0006099|GO:0045273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00193 - - gmx:100527668 369.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00193 05 4258070 4261190 Cca05g00193 05 4258070 4261190 ECH