Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00124 ATGTCCGACTCCGAAACCACACCCGAAAATTCCTCCGCGCCGCCGCACCCCGACACCGCCGTCTCCTTCAGCATTTGGCCCCCCGCTCAGCGCACCCGCGACGCCGTCATCAACCGCCTCGTGGAGACCCTCTCCGCCCCCTCCGTCCTCTCCAAGCGCTACGGCACTCTCTcctccgacgaagcctccgccgccgcccgccagatcgagggcgaggccttctccgccgccgctgcctccgccaacgcctccaccgAAGGCGTGGAGACGCTCCAGCTCTACTCCAAGGAGATCAGCAAGCGCATGCTCGAAACCGTCAAGGCCAGAGCTCCGCCCGGTAccgccgccgcagagggcgtctccgccgccgtctccgacgACCTTTAA 387 0.4367 MSDSETTPENSSAPPHPDTAVSFSIWPPAQRTRDAVINRLVETLSAPSVLSKRYGTLSSDEASAAARQIEGEAFSAAAASANASTEGVETLQLYSKEISKRMLETVKARAPPGTAAAEGVSAAVSDDL 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00124 128 PANTHER WPP DOMAIN-CONTAINING PROTEIN 1-RELATED 9 121 - -
Cca05g00124 128 PANTHER WPP DOMAIN-CONTAINING PROTEIN 1-RELATED 9 121 IPR044692 GO:0000278|GO:0048527
Cca05g00124 128 Pfam WPP domain 22 111 IPR025265 -
Cca05g00124 128 MobiDBLite consensus disorder prediction 1 23 - -
Cca05g00124 128 MobiDBLite consensus disorder prediction 1 18 - -
Cca05g00124 128 Gene3D WPP domain 22 115 IPR038214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00124 Cca-Chr5 2802344 2803039 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00124 - - gmx:547538 182.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00124 05 2802344 2803039 Cca05g00124 05 2802344 2803039 ECH
Cca05g00124 05 2802344 2803039 Cca03g01847 03 37815874 37816869 PCT