Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00105 ATGGTAGCTGAAATTTCAATGGCGATAAACCCCAAGCGAGCTCAGACGCCAACTCCCAGGAGGACTCCTCTGTTACCTTCTGAATCGGACAATGCGCTTGGGCCTCCACGCAGGCCCAAAGCACGAGAGGTTACTTCTCGTTACATgtcttcttcttcgtcttcgtcttcctccgtttcgtctcctCCGAGAAGATGCCACTCGCCGTTGGTAACCAGGACGCTGAATTCCACGAGAAcgaagcagacgccgacgccgacgccgacgccTTCGGCCAAGCGAGCTCAGTCGGCGGAGCGCCGCCGACAAGGCACTCCACGGCCGACCGGAGCGGATGCTCCGGCTGCTCAGAAGGTTCTCTTCACTTCCACCAGGAGCTTGTCCGTTTCCTTCCAGGGCGAGTCGTTCCCGATCCAGGTCAGAGCCACGAAACCGCCGCCGTCGCAGAGCTTCCGGAAGAGCACGCCGGAGAGGAGGAAGGTCGCGAcgacgccgacgccgacgccgacgccgGCGAGAGTCTCGGGAAACGGTAATTCGTTTCACGCCGAGAATGTGAGGTCGCTGGATCGGCACCGGTGGCCGGGGAAATTGCAGCAACAAGCGAATTGCGTGAACCGAAGCTTGGAGTGCGCTGATTCCACCGTTACGAAGCAAACGGACGCGCCGGCGAGCGTTGATAGGTCGTTGCAGAATCCGATGGCGTGTGTTCGCGGTTCTCACGACGCGACGCTGAGATCAGAGAGCTGCAAAATTAACGGATCTGAGTTTTACGAGCCCGAGCCTGTTCCTTCGGATAACGAAAGCGTGACTTCTGGAAGTTCCTCTGGAGAAGGACATGTGCTACGCGGTTCTCGAGGAATCGTGGTGCCGGCAAGGTTCTGGCAGGAGCATAATAATCGGTTACGACGCCAATCGGATACTCCGTCTTCTAGAATTGGAAATAAAGCAGCGGTTTCTACTCCTAGTCCTAGTCCAAGGCTTCTGGTGCCGAAGAAGTTACCGTTGGATTGTCCTGTTTCGTCTCCGCGAGGAGTTGTGAATGGCCGTATTCAAGGTTCTCCGATTCGCTCCGCAGTGCGTCCTGCTTCTCCGAGTAAGCTAGCGACGTCGGCTTCGGTGTGGTCTCCTTCGAGAGGATTGAGTCCCTCACGAGCGCAATACGGCGTGAGTAGTAGGTTCAGTAGTGAACCTTCTGTTTTGAGTTTTGCTGTTGATGTTCCGAGGGGGAAGGTAGGGGAGAATCGGATTGTCCATGCGCATTTGTTGAGACTCTTCCATAACAGGCTCCTTCAGTGGCGTTTTGTTAACGCTAGAGCCAATGCCGCCCTCTCTGCGCAGAAATTGAACGCGGAGAAAAGCCTCTATGATGCATGGGTAGCTACATCAAAACTACGAGAATCTGTTAGAGCCAAAAGAACAGAGGTTCAGTTGCTGAAACAACAGTTTAAGCTAATATCCATCTTGAAGGGCCAAATGGTGTATTTGGAAGATTGGGCTACTTTGGATCGGGTGTACTCCAGTTCACTTTCAGGAGCTATTGAAGCCCTGAGGGCTAGCACTCTTCGTCTTCCTGTTGTTGGTGGGGCCAAGACAGATTTGCTAAATTTGAAGGATGCAATTTGTTCAGCGATGGATGTGATGCAGGCAATGGCATCCTCCATATGCTTATTGTCGCCAAAGGTTGGACAATTAAATTCTCTGGTTGTTGAAAATGCCAACTTAAGTGCGAAGGAGCGCGTCTTGCTTGAAGAGTGCAGAGACCTTTTGTCAGTGATTACAACCTTTCAGGTTAGAGAGTATAGCCTGAGAGCGCATATTGCTCAACTGAAATGCTTACCCAGAAGTACAACAGTGAAAATAATAAGCAAATAA 1875 0.4923 MVAEISMAINPKRAQTPTPRRTPLLPSESDNALGPPRRPKAREVTSRYMSSSSSSSSSVSSPPRRCHSPLVTRTLNSTRTKQTPTPTPTPSAKRAQSAERRRQGTPRPTGADAPAAQKVLFTSTRSLSVSFQGESFPIQVRATKPPPSQSFRKSTPERRKVATTPTPTPTPARVSGNGNSFHAENVRSLDRHRWPGKLQQQANCVNRSLECADSTVTKQTDAPASVDRSLQNPMACVRGSHDATLRSESCKINGSEFYEPEPVPSDNESVTSGSSSGEGHVLRGSRGIVVPARFWQEHNNRLRRQSDTPSSRIGNKAAVSTPSPSPRLLVPKKLPLDCPVSSPRGVVNGRIQGSPIRSAVRPASPSKLATSASVWSPSRGLSPSRAQYGVSSRFSSEPSVLSFAVDVPRGKVGENRIVHAHLLRLFHNRLLQWRFVNARANAALSAQKLNAEKSLYDAWVATSKLRESVRAKRTEVQLLKQQFKLISILKGQMVYLEDWATLDRVYSSSLSGAIEALRASTLRLPVVGGAKTDLLNLKDAICSAMDVMQAMASSICLLSPKVGQLNSLVVENANLSAKERVLLEECRDLLSVITTFQVREYSLRAHIAQLKCLPRSTTVKIISK 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00105 624 MobiDBLite consensus disorder prediction 297 330 - -
Cca05g00105 624 MobiDBLite consensus disorder prediction 1 116 - -
Cca05g00105 624 MobiDBLite consensus disorder prediction 138 180 - -
Cca05g00105 624 MobiDBLite consensus disorder prediction 45 94 - -
Cca05g00105 624 PANTHER QWRF MOTIF-CONTAINING PROTEIN 9 1 617 - -
Cca05g00105 624 Pfam QWRF family 269 584 IPR007573 -
Cca05g00105 624 MobiDBLite consensus disorder prediction 306 322 - -
Cca05g00105 624 MobiDBLite consensus disorder prediction 255 283 - -
Cca05g00105 624 MobiDBLite consensus disorder prediction 11 25 - -
Cca05g00105 624 MobiDBLite consensus disorder prediction 160 180 - -
Cca05g00105 624 MobiDBLite consensus disorder prediction 138 152 - -
Cca05g00105 624 PANTHER AUGMIN FAMILY MEMBER 1 617 - -
Cca05g00105 624 MobiDBLite consensus disorder prediction 265 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00105 Cca-Chr5 2505013 2510942 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00105 - - gmx:100782524 882.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00105 05 2505013 2510942 Cca05g00105 05 2505013 2510942 ECH
Cca05g00105 05 2505013 2510942 Cca03g01813 03 37349432 37352580 PCT