Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00079 ATGAGGAGCAAGGGCCAGAGCGGGAACGTCTTGGTGAGAATCGCGGCGTCGCCGCTGCGAGCGCTGGGAAAAGCCAAGGACATGTACGTGCGAAGCATAACAAACTGCGGCAACAACATTAGTTACGGGGACCCCTTGGAAGGCGCCGGAAGGTTCTCCAGGAGCTACAGCGTGGCCACCGCCACGACGTCGTCGGAGATCGGCGGCGACGACTACGCCGAGCTTCTGAGGGCGGCGTCGGCGAGGACCCTGGTGAACCGAATCGACGTGGATTTGGTGGTCAAACAGCAACAGCGACAACAACATGGTACTTCCGAAGGGTTGCACAAGTCCAGCAGTGTCGGGATGGCGAGGATTGACGAGGATACGCCGTACGACGCTGATGGGGGCGTTGCTATTGTCACCGACCCGTATCCCAGGAGTCGGAGCTACGCTGTGGGGAAAAGCAAGCATGATTTTGGAACCAACGCTGTGGATTCTCGTAAATTCACCACCCCGACTCTTTAA 507 0.5838 MRSKGQSGNVLVRIAASPLRALGKAKDMYVRSITNCGNNISYGDPLEGAGRFSRSYSVATATTSSEIGGDDYAELLRAASARTLVNRIDVDLVVKQQQRQQHGTSEGLHKSSSVGMARIDEDTPYDADGGVAIVTDPYPRSRSYAVGKSKHDFGTNAVDSRKFTTPTL 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00079 168 PIRSF UCP031279 1 158 IPR016972 -
Cca05g00079 168 PANTHER - 4 149 - -
Cca05g00079 168 PANTHER OS07G0123800 PROTEIN 4 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00079 Cca-Chr5 1800439 1801546 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00079 - - gmx:100798910 209.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00079 05 1800439 1801546 Cca05g00079 05 1800439 1801546 ECH
Cca05g00079 05 1800439 1801546 Cca03g01790 03 37101560 37102733 PCT