Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00051 ATGAGCGCGAGCAACAAATGGCGAGCAATGCCGCACCACCAGCCTCTCTGCACGCGCACGCACCAGATCGGAGCCCTCCTCCTCGTTGCCACCACCTTCTTCTTCACGAAAGTCCTCTCTCCCTGCTCCCTCTCCACCAGCGTCGTCCACGTGTCGCAACCGCAGCTCCGGTGGGGGGAGTCGCAGCTATCCCTCAAGATCTACGTCTACGAGCCCGACGAAATCAACGGCTTAACGGAACTCATGCACGGAAGGGACGGTAAGATTCCAGAACAAGCTTGCCTCAAAGGCCAATGGGGCACTCAGGTGAAGATACACAAGTTACTTCTGCAATCAAAACAACGGACGCTGAAGAAGGAGGAAGCGGATCTGTTCTTTGTTCCATCGTATGTTAAATGTGCACGCATGATGGGTGGCCTTAATGACAAAGAAATTAACCATACGTATGTCAAGGTCATAAGCCAAATGCCATATTTTCGCTTATCTGGAGGTCGAAACCACATATTTGTTTTCCCCAGTGGTGCTGGTGCTCACTTGTTCAAATCATGGGCAACGTATATTAACCGCTCTATTATTCTTACCCCAGAGGGGGATCGGACTGACAAGAGAGATACCACTGCCTTCAATACATGGAAAGATATAATCATTCCAGGTAATATTGATGATGGTATGACTAAAACTGGGGCTACCGTGGTCCAGCCTTTGCCTCTGTCAAAGCGGAAGTACTTAGCTAATTATTTAGGACGTGCACAAGGAAAAGCTGGTCGTCTTAAGCTTATAGAGCTGGCTAAGCAGTTTCCAGAGAAGTTGGAATGTCCAGATTTGAAATTTAGTGGACCTGACAAGTTGGGAAGGAAAGAATATTTTGAACACCTACGCAATTCCAAGTTTTGCCTCGCACCACGTGGGGAGTCATCATGGACCCTTCGGTTTTATGAGTCTTTTTTTGTGGAATGTGTTCCAGTTATAATATCAGATCAAATAGAGTTGCCATTCCAGAATGTCATTGATTATAGTCAGATTTCAATAAAATGGCCATCCAGTCGAATAGGTCCCGAACTATTGCAGTACTTGGAATCTATACCAGATGAAGAAATAGAAGAAATAATAGCCCGTGGTCGACAAGTTAGGTGCTTGTGGGTGTATGTTTCAGATTCAGAATCTTGTTCAGCAATGCGTGGAATTATGTGGGAACTCCAGAGGAAAGTAAGGCAATTTCACCACTCAGCTGAAACATTTTGGTTGCACAATGGATCTATTGTAAACAGGAACTTGGTCGAATTTTTCAAATGGGAACTTCCTGTGCCTTTGCCTTGA 1317 0.4579 MSASNKWRAMPHHQPLCTRTHQIGALLLVATTFFFTKVLSPCSLSTSVVHVSQPQLRWGESQLSLKIYVYEPDEINGLTELMHGRDGKIPEQACLKGQWGTQVKIHKLLLQSKQRTLKKEEADLFFVPSYVKCARMMGGLNDKEINHTYVKVISQMPYFRLSGGRNHIFVFPSGAGAHLFKSWATYINRSIILTPEGDRTDKRDTTAFNTWKDIIIPGNIDDGMTKTGATVVQPLPLSKRKYLANYLGRAQGKAGRLKLIELAKQFPEKLECPDLKFSGPDKLGRKEYFEHLRNSKFCLAPRGESSWTLRFYESFFVECVPVIISDQIELPFQNVIDYSQISIKWPSSRIGPELLQYLESIPDEEIEEIIARGRQVRCLWVYVSDSESCSAMRGIMWELQRKVRQFHHSAETFWLHNGSIVNRNLVEFFKWELPVPLP 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00051 438 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 10 423 IPR004263 GO:0006486|GO:0016757
Cca05g00051 438 Pfam Exostosin family 64 350 IPR040911 -
Cca05g00051 438 PANTHER EXOSTOSIN FAMILY PROTEIN 10 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00051 Cca-Chr5 1197012 1200887 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00051 - - gmx:100814029 821.617
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00051 05 1197012 1200887 Cca05g00051 05 1197012 1200887 ECH