Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00045 ATGCACGTACATACTCTTTCACTTCCAGGGGCCCCAAGAAGACTTCGCCGCCGCCACCACGTGTCCCGTCCGAAATGTGCAGAGCCGGAGATGCTGTCAATGCCACCGGAAAAGTTAGAAGTTTTCAAGTCACTTGATGGATGGGCCTGGGAGTGTGTGGTGCCAATGCTGAAGCCCGTGGAGCAGTGCTGGCAGCCACAAAGCCTGGTCCCTGACTCCTCATTGCCGCACGAAGAGTTCATGGAAGAGGTGAAGGCTCTTCGCCAACGCGCCAAGGAGCTACCCGACGACTACTTGGTGGTCTTGGTGGGTGACATGGTCACCGAAGAAGCTCTTCCCACTTACCAGACCTTAATGACCACCATGGAAGGGTTTCAAGATGAGCCCGGAAGAAGCCCAAACCCATGGGCCGCGTGGACCCGAGGCTGGACCGCCGAAGAAAACAGACACGGGGATTTGCTCAGAACTTATTTGTATCTCTCTGGTCGCGTTCACATGAAGATGATCGATAAGACTATTCATTATCTCATTTCTGCTGGCATGGAGCATGGTTTGGGGAACAACCCGTATTTGGGATTTGTGTACACGTCATTCCAAGAGAGAGCGACGTTCGTGTCACACGGCAACACAGCTCGGCTTGCGAAGGAGGGAGGTGATCCGGTGCTGGCGCGCATATGCGGGACCATTGCGGCCGATGAGAAACGGCATGAGAACGTATACACGAGGGTCGTGGAGAAGCTTCTAGAAGTGGACCCCTCGGGCGCAATGGAGGCCATAGCGTATATGATGGAAAAGAAGATCACGATGCCCGCACACCTTATGTACGATGGGGAGGACCCCAGGCTATTCGAGCACTTTTCTGCGGTGGCTCAACGTACGGGCGTGTACACCGCTAATGACTATGCTGACATCTTGGAGTTTCTGATCGGACAGTGGAGATTGGAGAAGCTGGGAGGTTTGACGGCTGAGGGAAAGAGGGCGCAGGATTATGTGTGTGGGTTAGCACCCAGGATTAGGAAGTTGCAAGAGCGAGCTGATGAGAGGGCGCGTAAGATGAAGCCTCGTGCCGTCAAGTTCAGCTGGATCTTCAATAAAGAACTGCTTTTGTGA 1110 0.5396 MHVHTLSLPGAPRRLRRRHHVSRPKCAEPEMLSMPPEKLEVFKSLDGWAWECVVPMLKPVEQCWQPQSLVPDSSLPHEEFMEEVKALRQRAKELPDDYLVVLVGDMVTEEALPTYQTLMTTMEGFQDEPGRSPNPWAAWTRGWTAEENRHGDLLRTYLYLSGRVHMKMIDKTIHYLISAGMEHGLGNNPYLGFVYTSFQERATFVSHGNTARLAKEGGDPVLARICGTIAADEKRHENVYTRVVEKLLEVDPSGAMEAIAYMMEKKITMPAHLMYDGEDPRLFEHFSAVAQRTGVYTANDYADILEFLIGQWRLEKLGGLTAEGKRAQDYVCGLAPRIRKLQERADERARKMKPRAVKFSWIFNKELLL 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00045 369 MobiDBLite consensus disorder prediction 1 24 - -
Cca05g00045 369 Gene3D Ribonucleotide Reductase, subunit A 23 369 IPR012348 GO:0016491
Cca05g00045 369 PANTHER STEAROYL-[ACYL-CARRIER-PROTEIN] 9-DESATURASE 6, CHLOROPLASTIC 27 368 - -
Cca05g00045 369 SUPERFAMILY Ferritin-like 32 368 IPR009078 -
Cca05g00045 369 CDD Acyl_ACP_Desat 37 345 IPR005067 GO:0006631|GO:0045300
Cca05g00045 369 PANTHER ACYL- ACYL-CARRIER-PROTEIN DESATURASE-RELATED 27 368 IPR005067 GO:0006631|GO:0045300
Cca05g00045 369 Pfam Fatty acid desaturase 37 363 IPR005067 GO:0006631|GO:0045300
Cca05g00045 369 PIRSF Dlt9_acylACP_des 2 369 IPR005067 GO:0006631|GO:0045300
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00045 Cca-Chr5 1103824 1105393 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00045 7 367 Acyl Lipid Metabolism Gene Families AT1G43800 67.769 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00045 K03921 - gmx:100037478 575.089