Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00041 ATGAGAGGACCCTCTCCGACCACCGTGGAGCCGCGCCACCGTTCCTCTGCTTCATTCAGTGAAGATACTAGCAAGAGAAGGTCTCAAAGAAGTAAAGATTTTAAAGATGTTGAAAAGGCGTTGCATATTCCATTCCAAGATAGGGGTGTAACTTGCAAGCCAAATTGGAAGTTAGTTTTGGTTATTGTTATATTGGGTACCTTAGTTACAATTTTCCATCCTCCAGCTGTTTATAATACTGATCATCTATCAAACTCTATTTCGCGGCCAACTTTTATAAGTAACTGGAAAGGAGTGTTTGATGGAATTGATTCGCGTTATGAATCATTTCTAAATATTGAGTGGGACCAAATATCTAATGTTCTTGAAAATTTGAAGGATAAGGACACATATCAGGGTGTTGGCTTATTAAACTTCAATGACAGTGAGATTGACCACTGGAAGCAGCTGGTGCCAGAAGCAGAGCATGTAGTGCTTCACCTGAACTATGCTTCAAATAACATTACTTGGGAAGTCCTTTATCCAGAATGGATAGACGAAGAAGAAGAATATGAGTTTCCTGTTTGTCCAACACTACCTAGGATTCAGGTTCCAGGAAAGCCACGGCTTGATCTTATTGCTGTCAAGCTTCCTTGTGACAAGTCAGGGCGCTGGTCAAGAGATGTAGCTCGTTTACACCTGCAGATTGAAGCTGCAAGACTCGCTGCCTCTTCCAAAGGATATCAACCGGTGCATGTGCTTTTGGTCACTGATTGCTTCCCAATCCCAAATCTCTTTACTTGCAAGGAACTTATACAACGTGACGGGAGCGCCTGGCTTTATGAACCTAACCTGAATACACTGAGAGAGAAACTGCAGCTGCCAATTGGTTCGTGTGAACTAGCAGTTCCTTTGAAGGCTAAAGAGAATTTTTATTCAGAAAGGCCACACAAGGAAGCTTATGCAACCATCCTGCACTCTGCTCAATTGTACGTTTGTGGAGCCATTACTGCAGCTCAAAGTATTCGCATGACTGGTTCAACACGGGATCTTGTGATTCTTGTTGATGAAACAATTAGTGACTATCATAGAGGGGGCTTGGAGGCTGCTGGATGGAAGATCCATACAATCCAAAGAATCAGGAATCCAAATGCAGAACCAGAAGCATATAACGAGTGGAACTACAGCAAATTTCGTCTCTGGCAGCTAACAGATTATGATAAAATCATTTTCATAGATGCCGACCTTCTTATACTTAGAAATATCGATTTCCTTTTTGAGATGAACGAAATATCTGCCATAGGAAACAATGCTACGCTGTTCAACTCGGGTGTAATGGTGATTGAACCATCAAATTGTACGTTTCAACTGCTCATGGATCACATCAACGATATTGTCTCCTACAATGGTGGGGACCAGGGGTATCTGAATGAAATCTTCACCTGGTGGCACCGGATTCCAAAACATATGAACTTCTTGAAGCACTTCTGGGAAGGTGATGAGGAAGAGAAAAAAGAGATGAAAACTCGTCTCTTCGGAGCTGATCCACCAATCCTTTATGTCATCCATTACCTGGGTAATAAACCATGGCTTTGCTTCCGAGACTATGACTGCAACTGGAACGTGGACACTCTGCAGGAGTTTGCAAGCAATGTGGCTCACGCAAGATGGTGGAAGGTGCATGATGCAATGCCAGAAAACTTGCAGAAGTTCTGTTTGCTTAGGTCCAAGCAGAAGGCTGCATTAGAGTGGGATCGTAGACAAGCAGAAAAAGGAAACTACAGTGATGGTCACTGGAAAATTAAGATAAAAGACCCACGATTGGAAACGTGCTTTGAGGATTTCTGTTTCTGGGAGAGCATGTTGTGGCATTGGGGTGAGAAGAATTGGACAGATAATTCTACTGTTAACAATTCACCACCTGTTATCAAAACCGAATCTCTCTCTTCTTTATGA 1935 0.4253 MRGPSPTTVEPRHRSSASFSEDTSKRRSQRSKDFKDVEKALHIPFQDRGVTCKPNWKLVLVIVILGTLVTIFHPPAVYNTDHLSNSISRPTFISNWKGVFDGIDSRYESFLNIEWDQISNVLENLKDKDTYQGVGLLNFNDSEIDHWKQLVPEAEHVVLHLNYASNNITWEVLYPEWIDEEEEYEFPVCPTLPRIQVPGKPRLDLIAVKLPCDKSGRWSRDVARLHLQIEAARLAASSKGYQPVHVLLVTDCFPIPNLFTCKELIQRDGSAWLYEPNLNTLREKLQLPIGSCELAVPLKAKENFYSERPHKEAYATILHSAQLYVCGAITAAQSIRMTGSTRDLVILVDETISDYHRGGLEAAGWKIHTIQRIRNPNAEPEAYNEWNYSKFRLWQLTDYDKIIFIDADLLILRNIDFLFEMNEISAIGNNATLFNSGVMVIEPSNCTFQLLMDHINDIVSYNGGDQGYLNEIFTWWHRIPKHMNFLKHFWEGDEEEKKEMKTRLFGADPPILYVIHYLGNKPWLCFRDYDCNWNVDTLQEFASNVAHARWWKVHDAMPENLQKFCLLRSKQKAALEWDRRQAEKGNYSDGHWKIKIKDPRLETCFEDFCFWESMLWHWGEKNWTDNSTVNNSPPVIKTESLSSL 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00041 644 MobiDBLite consensus disorder prediction 15 33 - -
Cca05g00041 644 SUPERFAMILY Nucleotide-diphospho-sugar transferases 311 562 IPR029044 -
Cca05g00041 644 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 309 560 IPR029044 -
Cca05g00041 644 PANTHER UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 3-RELATED 14 625 IPR030519 GO:0005794|GO:0009834|GO:0015020|GO:0045492
Cca05g00041 644 MobiDBLite consensus disorder prediction 1 33 - -
Cca05g00041 644 PANTHER GLYCOGENIN SUBFAMILY MEMBER 14 625 - -
Cca05g00041 644 CDD GT8_Glycogenin 312 557 - -
Cca05g00041 644 Pfam Glycosyl transferase family 8 318 524 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00041 Cca-Chr5 1039065 1043278 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00041 4 620 Glycosyltransferase AT1G77130 69.021 0.0 879
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00041 K20890 - gmx:100796246 1251.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00041 05 1039065 1043278 Cca05g00041 05 1039065 1043278 ECH