Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00037 ATGAAGAGCACTAGGAGAGAAACGGAGAAGAAATCGGAGATAGGTTCTGCCATTGAAGAGCTTTCTATGATGACCATAGTCAAACCTGGTGAAGATCATGATCACTCCGCACACATCCCCACCAAGCCTTTCCTCTCACTTTGTTACTTGGTTCTTCAAGTTCTTGATAAGATAGGGCCAACAATGGTTGTTTTGAGGCAAGACGTGCACCAGAATATTAAGAAATTGGAACTGATGCATGAGTCAAATCCCTCATTGAACTCGAATTTGGTTGAGATTTTGAAGTCAGAAGCAAGAGAAGGCAATGCACGGAAAGGGTCTAGCTGCAGTAAGGCCCTTGTTTGGCTTACTAGGACCTTGGATTTCACTTCGTTATTATTACAAACACTAGCAAAAGATCCTGAGAAGAGAATGGAACAAGTAGTTGAAGAGGCTTATGATGTAACATTAAAACCGTGGCATGGATGGATTTCATCAGCTGCTTTCAGAGTGGCTCTAAGACTGGTCCCAGAAAGTAAAACTTTCGTGAATCTCCTTAAAACTGAAGATGAAAACCATGACACCCTAATGGAGAAAATGCAGATTTTGGTCTCTTTGTTTGTGCCTTTTCTTGAGGATATCCATTGTATTCTAAGATTGTATAACTTGGACAAGCTAAAGTCAACTTGA 669 0.4081 MKSTRRETEKKSEIGSAIEELSMMTIVKPGEDHDHSAHIPTKPFLSLCYLVLQVLDKIGPTMVVLRQDVHQNIKKLELMHESNPSLNSNLVEILKSEAREGNARKGSSCSKALVWLTRTLDFTSLLLQTLAKDPEKRMEQVVEEAYDVTLKPWHGWISSAAFRVALRLVPESKTFVNLLKTEDENHDTLMEKMQILVSLFVPFLEDIHCILRLYNLDKLKST 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00037 222 Pfam Glycolipid transfer protein (GLTP) 39 179 IPR014830 GO:0005737|GO:0120009|GO:0120013
Cca05g00037 222 PANTHER GLYCOLIPID TRANSFER PROTEIN-RELATED 3 219 - -
Cca05g00037 222 SUPERFAMILY Glycolipid transfer protein, GLTP 36 219 IPR036497 -
Cca05g00037 222 Gene3D Glycolipid transfer protein 3 218 IPR036497 -
Cca05g00037 222 PANTHER GLYCOLIPID TRANSFER PROTEIN (GLTP) FAMILY PROTEIN 3 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00037 Cca-Chr5 938241 940022 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00037 39 184 Acyl Lipid Metabolism Gene Families AT2G34690 23.810 1.50e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00037 - - gmx:100799957 397.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00037 05 938241 940022 Cca05g00037 05 938241 940022 ECH