Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00025 ATGAACTGTCTCCTTTTCACTTGGTATGGATTGCCAGTTGTAAGCAACAAGTGGGAAAATTTCCCTCTGGTCACAGTTAATGGAGCTGGCATTCTTTTTGAACTATCTTATGTTCTCATTTATTTCTGGTTTTCTTCACCCAAAGGAAAGGTGAAGGTGGCCATGACAGCAATACCAGTTCTTATAGTGTTCTGTGTCATTGCTATATTATCATCTTTTGCCTTCCACGATCATCGTCACCGAAAGCTTCTCGTAGGGGGTGTAGGCTTGGGGGTCTCAATAGCAATGTATTCATCTCCTTTGGTTGCAATGAAGAAAGTGATACAAACCAAGAGTGTGGAATTCATGCCACTACCTTTATCTTTGTGCTCATTCTTGGCCAGTTCACTGTGGCTAACTTATGGACTCCTCATTCGGGATATATTCGTTGCGGGACCAAGTGTTATTGGAACTCCATTAGGCATACTCCAACTCGTTCTCCACTGCAAATACAGGACGAGGAGAGAAACTGAAGAGAACAACAAGGTGGACCCGCACAAGGGTAACATAGAGAAGGTGGACTTGGAAATGGGACATGGAAAAGAATGTGTCAGTTCTTAG 600 0.4317 MNCLLFTWYGLPVVSNKWENFPLVTVNGAGILFELSYVLIYFWFSSPKGKVKVAMTAIPVLIVFCVIAILSSFAFHDHRHRKLLVGGVGLGVSIAMYSSPLVAMKKVIQTKSVEFMPLPLSLCSFLASSLWLTYGLLIRDIFVAGPSVIGTPLGILQLVLHCKYRTRRETEENNKVDPHKGNIEKVDLEMGHGKECVSS 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00025 199 Gene3D - 85 177 - -
Cca05g00025 199 PANTHER RAG1-ACTIVATING PROTEIN 1 1 188 - -
Cca05g00025 199 Pfam Sugar efflux transporter for intercellular exchange 84 167 IPR004316 GO:0016021
Cca05g00025 199 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 1 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00025 Cca-Chr5 520063 522817 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g00025 2 186 Miscellaneous Gene Families AT5G53190 54.404 4.49e-75 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00025 K15382 - gmx:100785477 344.354