Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01663 ATGTGGTTTCTGAGTTATTGCAGTCTAATTTCACAGGATAAACTACCTGAAGCTCGTGTTGTTTATTGCTCAGCGACTGGAGCATCTGAGCCGCGCAATATGGGTTATATGGTTCGACTTGGTCTTTGGGGAGATGGGACTTCATTTGCTGATTTCCGTGAATTTCTAGGTGCTCTTGACAGAGGGGGTGTTGGAGCTCTTGAATTAGTTGCCATGGACATGAAAGCAAGGGGTATGTACTTATGTCGGACACTTAGCTATGAGGGTGCAGAGTTTGAAGTTATTGAAGCACCACTAGAAGAAAAAATGATGGTATGGGACACAATTGTTTACTTGTGCTATTATTTACCGAAGTTGTAA 360 0.425 MWFLSYCSLISQDKLPEARVVYCSATGASEPRNMGYMVRLGLWGDGTSFADFREFLGALDRGGVGALELVAMDMKARGMYLCRTLSYEGAEFEVIEAPLEEKMMVWDTIVYLCYYLPKL 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01663 119 Pfam P-loop containing NTP hydrolase pore-1 10 104 IPR039187 -
Cca04g01663 119 PANTHER STRAWBERRY NOTCH-RELATED 11 105 IPR026741 GO:0006355
Cca04g01663 119 PANTHER PROTEIN STRAWBERRY NOTCH 11 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01663 Cca-Chr4 26466782 26467577 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01663 - - ccaj:109789346 248.44