Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01621 ATGGTCTGTATTGTTTGTGAAACAATAGATGGTAAGGTTACAATATGTCAGGAGAGTATTGAATCCGTTGATGCACCGAACAAAACAATCACCTACAAGCTCTTCGGTGGAGACATCAATCATCAGTTTAAGGTCTTTAAGCTCATCTTTCAAGCGATTGATAAGGGTCATGGTGCTATTATCAAATGGACCGTTGAATATGAGAAGAATGCTGATGAAGTTGATCCTCCATATGGCTACATCGAGTACCTACACACAGGCACTAAAGAAATTGATGCTAACCTTCTCAAGGCTTAG 297 0.3973 MVCIVCETIDGKVTICQESIESVDAPNKTITYKLFGGDINHQFKVFKLIFQAIDKGHGAIIKWTVEYEKNADEVDPPYGYIEYLHTGTKEIDANLLKA 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01621 98 Gene3D - 3 98 IPR023393 -
Cca04g01621 98 SUPERFAMILY Bet v1-like 16 97 - -
Cca04g01621 98 PANTHER PATHOGENESIS-RELATED PROTEIN BET V I FAMILY PROTEIN 8 96 - -
Cca04g01621 98 Pfam Pathogenesis-related protein Bet v 1 family 8 97 IPR000916 GO:0006952
Cca04g01621 98 PANTHER MLP-LIKE PROTEIN 423 8 96 - -
Cca04g01621 98 SMART Bet_v_1_2 1 98 IPR000916 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01621 Cca-Chr4 25051135 25051594 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01621 - - gmx:100500325 150.984